Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01948 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCATGCACTGTGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAGCAGAAGCTTCTACAGTTATCCTCAAACCAGCGAGTCGACTCGGTCGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAAGCTCGTCCTCGATACCCTCGCCTCGATTCTGCACTCCGACTCTGAACCTCTCACCGTCGCAAAGTTCGACGAAATCGATTCCGTTGGCGTCGACGTGCATGATCTGGTTTTGTTCCTCTACATTCAATCCTACAAGAGAATCCTCCCGCGGACGCACAAGGACTCCGTCGCAGTCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTTCTTGTCCGCTCTCTCGCCGCTTCAGCTGGTACGCAGCAACAGTCGGCGGTTTATGCCTTCTCAGGCTGATGAAGAGGCACATCAGTTGTCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTCTAGCAGAGCCTGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTCGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCCAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAATATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGACGTTGCCATGACTGATGCAAGCACTGTGTCAGTTAAGGTCTCAACAAGTACTAGAGGTGCAAGTTTCATTGAAGGGATCTCTAAATCATCATATACGAAGCTTGCATCTGACATTAAAGGTTCTTCTGTCAAGGTTCTTAATTGCCACGAGTCTTCCATCTACATCCTAGCACCATTGAGATATGCCACTGTTTATGGATGTTCAGATGCTACAATAGTTATTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAACGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTTTTGGGGGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAACTGGAGGAGCATATGAATGAAGTTGGAATTGTTCCTACAGTGAACCGATGGAATGAACCTCTCGCATTTGGAATGGTTGATCCCCATGATTCATTATCTCATCCAGCAGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACCCAGGTGGACCCAGATCAGTTCACTAATTTTGTGATTCCGAGCTGGCTTGGAGGAGACTCTACTGGGTCTGCAGAAGGCAATCCATTCACGCTACCAGATGCTTACATGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGTTAAGGCAACTCATACGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAATTTTCATCTGCACTTCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1698 0.467 MTEPTEPSTSSSLARDPCTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNQRVDSVAISDSLQISIEHAKLVLDTLASILHSDSEPLTVAKFDEIDSVGVDVHDLVLFLYIQSYKRILPRTHKDSVAVADVWPSTSAFDGFLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSTRGASFIEGISKSSYTKLASDIKGSSVKVLNCHESSIYILAPLRYATVYGCSDATIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLEEHMNEVGIVPTVNRWNEPLAFGMVDPHDSLSHPAGVSDVQAESATQVDPDQFTNFVIPSWLGGDSTGSAEGNPFTLPDAYMASQHKNHKNLGELRQLIREASLEESRKREFSSALHVYFKDWLYASGNIRQLYCLQGD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01948 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Phac1g01948 565 SMART carp 337 374 IPR006599 -
Phac1g01948 565 SMART carp 375 409 IPR006599 -
Phac1g01948 565 Gene3D - 309 483 IPR016098 -
Phac1g01948 565 PANTHER UNCHARACTERIZED 19 563 IPR039589 -
Phac1g01948 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 282 435 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01948 Phac-Chr1 29330478 29338689 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01948 K16810 - gmx:100780410 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01948 1 29330478 29338689 Phac1g01948 1 29330478 29338689 ECH