Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01942 ATGGTCACTGTGTTTAGACTATGCTTTCTCACGCTGTTGTTCTTCTCCCCAGTTGCATTCTCTGAACTCTGCAACCCACAGGACAAGAAAGTCTTGCTGCAAATAAAAAAGGACTTCAACAACCCTTACCTTCTAGCATCCTGGAACCCAGACACTGATTGCTGTCAATGGTACTGCGTCGAGTGCCACCCTCAAACGCACCGCATCACCTCCCTCGTCATTTTATCCTCTGTTCCCGATACCAATTTATCGGGGCCAATACCACCTTCCGTCGGTCACCTCCCTTACCTAGAGACCCTCCGATTCCACAAGCTTCCTAAACTCACCGGCCCAATTCAGCCCACCATCGCCAACCTCACTAAACTCAAGGAGCTCTATATCAGCTGGACCAACATCTCCGGCCCAGTACCCCATTTTCTGGCCCAGCTCACCAATCTCCAGTTTCTCGACCTTTCCTTTAATAACCTCTCCGGCCCCATACCAAGCTCGCTTTCCCAGTTGCCTAACCTCTTGTCCCTGCGCTTGGACCGGAACAACCTCACGGGCCCCATCCCGGACTCCTTTGGCTCATTCAAGAGGTCTGGCCCAAGCCTTCTGCTGTCCCACAACCAGCTTTCGGGGCCCATTCCGGCTTCTCTCGCCAACATAGACCCACAACGCATAGACTTTTCAAGGAACAAACTGGAAGGCGACGCTTCCATGCTTTTCGGCAGAAACAAAACGACGCAGATGGTTGACGTTTCGAGGAACCTGTTGGCGTTTGATTTATCCAAAGTGGAGTTCCCCACCAGCTTGATATCGTTGGATTTGAATCACAATAAGATCACTGGAAAGATTCCCGTGGGATTGACCGCAGTAGATTTTTTGCAGGGGTTCAACGTCAGCTATAATCGACTTTGTGGTGAGATTCCGCAGGGAGGACGACTGCAGAAGTTTGATGTCGATGCATACTTTCATAACAAGTGCTTGTGTGGATCGCCCCTTCCCAACTGTAACTGA 999 0.5065 MVTVFRLCFLTLLFFSPVAFSELCNPQDKKVLLQIKKDFNNPYLLASWNPDTDCCQWYCVECHPQTHRITSLVILSSVPDTNLSGPIPPSVGHLPYLETLRFHKLPKLTGPIQPTIANLTKLKELYISWTNISGPVPHFLAQLTNLQFLDLSFNNLSGPIPSSLSQLPNLLSLRLDRNNLTGPIPDSFGSFKRSGPSLLLSHNQLSGPIPASLANIDPQRIDFSRNKLEGDASMLFGRNKTTQMVDVSRNLLAFDLSKVEFPTSLISLDLNHNKITGKIPVGLTAVDFLQGFNVSYNRLCGEIPQGGRLQKFDVDAYFHNKCLCGSPLPNCN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01942 332 FunFam Polygalacturonase inhibitor 1 22 332 - -
Phac1g01942 332 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Phac1g01942 332 Gene3D Ribonuclease Inhibitor 22 332 IPR032675 -
Phac1g01942 332 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Phac1g01942 332 Pfam Leucine Rich repeat 263 278 IPR001611 GO:0005515
Phac1g01942 332 PANTHER POLYGALACTURONASE INHIBITOR 1 10 331 - -
Phac1g01942 332 SUPERFAMILY L domain-like 23 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01942 Phac-Chr1 29192985 29193983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01942 108 326 Receptor kinase-like Gene Family AT4G08850 33.182 4.99e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01942 - - gmx:100799184 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01942 1 29192985 29193983 Phac1g01942 1 29192985 29193983 ECH