Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01916 ATGGCACCAAGATGGAAAGGAAAAGATGCACAAGCTAAAAAGGACGCAGAAGCTGAGGCGCTCAAGGAACCCATGTCAAAGATTGTATCTCAACTTACGTCTTCTCTAGTTCAATCAAATACTTGTGGACTTCTCTCTGATAATAGTGTACAGTTAGCAGTGGGAGTAGAACAACTTGATCTGCTTGATAAAGCATGCTTTGGTCGACCTGTGAGAACAATTGAAAAGGACAAACACTGGTTTCAATTAAGCTTCGAGGAGGCATTCTACCTATGCTACTCCTTGAAATGCCTTAAGATTAAGGGCAGTGGTACTGGTCCCCAAAACGATGAAGAGCTGTGGCATTACATGAAGTCCAAGAAAGAAACATTCCCTTGTTTCTACAAGGCTTATTCCCACCTTCGAATGAAAAACTGGGTAGTGAGGTCAGGATCTCAGTATGGTGTAGACTTTGTTATCTATCGCCATCATCCATCTCGGGTCCATTCTGAGTATGGTGTGCTTGTTTTATCAGATGGGGAAGATAAAGATCTGAATGGAAGACTGAGAGTATGGTCTGATATTCATTGCACAACTCGACTTGTTGGAAGTGTTGCAAAAATCTTACTGGTTCTACATGTCAATAAAATTGGTAACAATAACGAATCTCCATTATGTCTTGCAAACTATACCGTTGAAGAGTGCACAATCACCAGATGGAGTCCAGAGCAGAACCGTGAAAAGATGTAG 729 0.4156 MAPRWKGKDAQAKKDAEAEALKEPMSKIVSQLTSSLVQSNTCGLLSDNSVQLAVGVEQLDLLDKACFGRPVRTIEKDKHWFQLSFEEAFYLCYSLKCLKIKGSGTGPQNDEELWHYMKSKKETFPCFYKAYSHLRMKNWVVRSGSQYGVDFVIYRHHPSRVHSEYGVLVLSDGEDKDLNGRLRVWSDIHCTTRLVGSVAKILLVLHVNKIGNNNESPLCLANYTVEECTITRWSPEQNREKM* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01916 242 Gene3D - 123 218 IPR011856 GO:0003676
Phac1g01916 242 FunFam tRNA-splicing endonuclease subunit Sen2-1 123 219 - -
Phac1g01916 242 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 3 73 IPR006676 GO:0000213|GO:0006388
Phac1g01916 242 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 211 IPR006677 GO:0000213|GO:0006388
Phac1g01916 242 CDD tRNA-intron_lyase_C 128 212 IPR006677 GO:0000213|GO:0006388
Phac1g01916 242 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 123 209 IPR036167 GO:0006388
Phac1g01916 242 Pfam tRNA intron endonuclease, N-terminal domain 44 114 IPR006678 GO:0000213|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01916 Phac-Chr1 28981511 28984845 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01916 K15322 - gmx:100810335 410.223