Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01914 ATGAACAACCAACTCATCTTCCTTCTATTCTTCCTTCTCACCCAATCTCTTCTCGCCACCTCATCGCCTCCAAACCCGATCCCAATCACGCTCTCCGTCGCCGACTTCGGCGCCGCCGGTGACGCCAGCTGCTACGATACCGAACCTATCCAATCGGCCATCAACTCCTGTCCAGCGGGCGGTCCCTGCCACGTCATCTTCCCGGCGCCGGGAAAATACCTGACGGCCACCGTGTTCCTGAAATCCGGCGTGCTGCTGGTCGTGGAGCCTGGTGCCACCATCCTGGGCGGCTCCAGGCTGGAGGACTACCCGAAGGAGTCGTGGCGGTGGTACGTGGTGGTAGCGGAGAATGCGACGGACGTGGGAATCCGCGGCGGTGGAGTGGTGGATGGTCAGGCTTCGAAATTCGTAGTGAGGGAAGATCCGAGGAAGAACGTGATGGTTAGTTGGAACCAAACTGGGGCTTGCTTAGGAGACGAATGCAGACCTAGACTCATTGGATTCATTGGTTGCAACAATGTTGAAGTTTCTAACATCACTCTTAACCATCCTGCTTATTGGTGTTTACACTTGGTGCGGAGTAATAACATATCCATTAAAGATATTGCAATTAATGGGGACTTTAACATACCAAACAATGATGGGATTGACATTGAGGACTCAAACAACACAGTAATCACTCGATGCCACATCGATACTGGGGATGATGCAATCTGTCCAAAGTCATACACAGGTCCTGTTAACAACCTTACAGTCACTGACTGTTGGATTCGATCCAAATCTTCAGCAATTAAACTTGGCAGTGCTAGTTGGTTTGATTTCAAGCATTTTGTGTTTGATAATATCACTATTGTTGATTCTCATAGAGGGATTGGATTCCAGATCCGTGATGGAGGAAATGTAAGTGACATTGTATTCTCAAACATTAATATCAGCACAAGATATTATGACCCGTTATGGTGGGGGAGAGCAGAGCCTATCTATGTCACGAGTTGCCCACGAAACTCAGCCTCAAAGGAGGCTTCAATCTCTGATGTATTTTTCATTAACATCACAGCAAATTCTGAAAATGGCATCTTCCTATCTGGTTCAAAGAGAGGATTGCTTAGAAATTTGAGATTCATCAACATGGACGTTACATATAGAAGGTTCACTAATTATGCTGGTGGGTTATTGGACTACAGGCCAGGATGCCAAGAGTTAGTTAAACACAGGACTGCGGGCATAATGATGGAGCACATTGAAGGGCTTGAGGTTAAAAATGTTGAAATTAGATGGTCAAACAACCAACTAGAGCAGTGGAATAATCCTTTAGAGTTCAAACCATCTACTGTGAATAACATATCTTTCCTGAATTTTAGTTCTGGTTTGTATACAGATAGCAAATCAAATTATTAA 1398 0.4571 MNNQLIFLLFFLLTQSLLATSSPPNPIPITLSVADFGAAGDASCYDTEPIQSAINSCPAGGPCHVIFPAPGKYLTATVFLKSGVLLVVEPGATILGGSRLEDYPKESWRWYVVVAENATDVGIRGGGVVDGQASKFVVREDPRKNVMVSWNQTGACLGDECRPRLIGFIGCNNVEVSNITLNHPAYWCLHLVRSNNISIKDIAINGDFNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSYTGPVNNLTVTDCWIRSKSSAIKLGSASWFDFKHFVFDNITIVDSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPLWWGRAEPIYVTSCPRNSASKEASISDVFFINITANSENGIFLSGSKRGLLRNLRFINMDVTYRRFTNYAGGLLDYRPGCQELVKHRTAGIMMEHIEGLEVKNVEIRWSNNQLEQWNNPLEFKPSTVNNISFLNFSSGLYTDSKSNY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01914 465 Gene3D - 12 389 IPR012334 -
Phac1g01914 465 Pfam Glycosyl hydrolases family 28 110 381 IPR000743 GO:0004650|GO:0005975
Phac1g01914 465 PANTHER PECTIN LYASE-RELATED 26 425 - -
Phac1g01914 465 SUPERFAMILY Pectin lyase-like 23 393 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01914 15 459 Glycoside Hydrolase AT3G57790 66.812 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01914 - - gmx:100794954 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01914 1 28977612 28981237 Phac1g01914 1 28977612 28981237 ECH