Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01879 ATGTGGTATGGTTTTGCAGGGGATAACGCGGTCGAGACTGATCAAGGCCTTCACCTAGTCTACATGCATGCTGGCACCAACCCCTTTGAAGTCATCAATCAAGCAGTCAAGGCTGTGGAAAAACACATGCAAACTTTTCTTCACCGTGAGAAGAAAAAGTTGCCATCTTTTCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGATGGTCTGAAAAGTCTATCTGAGGGAGCTACACCACCACGGTTCCTCATCATAGATGATGGCTGGCAACAGATTGAAAGTAAACAAAAGGATCCTGACTGTGTTGTACAAGAAGGGGCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAGAATACTAAATTTCAGAAGAAAACACCCAGCAATGAGCAGACATCAGGTCTGAAGCATTTAATAGATGGAGTAAAGCAGCATCACAACGTGAAAAATGTTTATGTATGGCATGCACTTGCTGGTTATTGGGGTGGAGTGAAGCCCGCAGCAACTGGCATGGAGCATTATGACACAGCCTTGGCCTATCCAGTGCAGTCACCAGGTGTCCTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCCGTACATGGCCTTGGCCTAGTGCACCCAAAGAAGGTTTTCAATTTCTACAATGAGCTCCATGCTTACTTGGCTTCATGTGGAGTGGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCTGGACATGGTGGAAGAGTCTCTCTTACACGAAGCTATCATCACGCTCTTGAGGCTTCCATTGCTCGTAACTTTACTGACAATGGATGCATTGCTTGCATGTGTCACAACACTGATGGCCTTTATAGTTCCAAGCAGACTGCTGTTGTGAGAGCCTCTGATGATTTCTACCCTCGTGATCCCGCTTCCCACACCATCCATATTTCATCTGTTGCATACAACTCGCTTTTCCTTGGAGAGTTCATGCAACCTGATTGGGACATGTTTCATAGTTTACACCCTGCAGCAGAATATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCAATTTATGTTAGTGACAAGCCAGGCCACCACAATTTTGATCTTCTTAAGAAGCTGATTCTTCCCGATGGTTCGGTTCTCCGAGCACAGTTACCAGGCAGGCCAACTCGTGATTCTCTCTTTGTTGATCCAGCCAGAGATGGGACTAGCTTGCTCAAAATCTGGAACATGAACAAATGCTCTGGAGTTGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGATAGAGAAAAAAACTCGCATCCATGATACATCTCCCGGCACACTCACTGGCTCTGTCTGTGCCTTGGATGTTGACCCTATCACACAAGTAGCAGGTGCTGAATGGCTTGGAGAGACAATTGTTTATGCTTATAAATCAGGTGGGGTGATTCGGCTACCAAAGGGGGTTTCAGTTCCCGTGACTCTAAAAGTTCTTGAGTTTGAACTTTTCCATTTCTGTCCAATCCATGAAATAGCACCAAGTATTTCATTTGCAGCAATAGGGCTACTGGATATGTTCAACACTGGAGGAGCTGTGGAGCTGGTTGAAATTCACAGAGCCTCTAACAACAAACCAGAACTGTTTGATGGTGAGGTGTTGTCAGAGTTAACCTCTTCTCTCAGTCCTCACCGAGCAGCAACCGCAACTATTTCTCTTAGAGTCAGGGGAACAGGCAGATTTGGAGTTTACTCCTCTCAACGCCCACTGAAGTGTGTAGTAGGTGGCACTGAAACCGACTTCAGCTATGACTCGGAGACTGGGTTGGCAACCTTCTCCATCCCAGTTCCTCAAAAGGAGATGTACAGATGGGCAATAGAAATCCAAGTTTGA 1908 0.4623 MWYGFAGDNAVETDQGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEDGLKSLSEGATPPRFLIIDDGWQQIESKQKDPDCVVQEGAQFATRLTGIKENTKFQKKTPSNEQTSGLKHLIDGVKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFTDNGCIACMCHNTDGLYSSKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGHHNFDLLKKLILPDGSVLRAQLPGRPTRDSLFVDPARDGTSLLKIWNMNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCALDVDPITQVAGAEWLGETIVYAYKSGGVIRLPKGVSVPVTLKVLEFELFHFCPIHEIAPSISFAAIGLLDMFNTGGAVELVEIHRASNNKPELFDGEVLSELTSSLSPHRAATATISLRVRGTGRFGVYSSQRPLKCVVGGTETDFSYDSETGLATFSIPVPQKEMYRWAIEIQV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01879 635 Gene3D Aldolase class I 59 382 IPR013785 -
Phac1g01879 635 Pfam Raffinose synthase or seed imbibition protein Sip1 6 618 IPR008811 -
Phac1g01879 635 SUPERFAMILY (Trans)glycosidases 57 391 IPR017853 -
Phac1g01879 635 PANTHER - 6 633 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01879 Phac-Chr1 28461104 28466730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01879 6 418 Glycoside Hydrolase AT3G57520 85.230 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01879 K06617 - gmx:100807861 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01879 1 28461104 28466730 Phac1g01879 1 28461104 28466730 ECH