Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01777 ATGGGAGTGGTTCATAATGCATACTCAAATGGAAGTGTTGGTGGTCAGAATTGTAATGGGGTGGAGGAGAAGCTTGATGCTTTGAGGAGGATCATTGGGAAGGCTGATGGTGATCCTCTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTACAAGACACTTATGGTCAATTCAGGGACAAGATACATATCAGGATATGGAGAAGAGCAGGAAGGGCAGTGGACAGAGGCACTGCTGAACATCTCTTTGAGGTCATCAACTCAAGGGAAGATGTGTTGAGGAGGTTGATCAGGCGTTGTGCATATCTGAAATATGTGGAGGCAAGGCTTGGTGACAGGACCCTCTTTGCTGATGAAATTCTCAAAGATGGTTTTTGCTTGAACATGATTGATACCCCACTTTGTCCTTTGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTCAATGGTTTGCCTTCTACAGAAACACGTGAGATCTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGAATCACAGTGCCTATAATCATCTCTTTGTCAAAGGGTATAGAGGCTGCATTGGAGCCTCTGCCACATATTATTACTCCCACAAAGATGATTAACCAAGCAACTGGAGTGCCAATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCAAGAATATGTGGAGCCGAGAAATGGAGAAAACATCTGGCCAAGTTTTTACGACAACCACAATTTATTGTCTGGGATAACAGTGACCTTGTCACACATGAGGTCATGGGTGGTTTGAAAAACGTCTATGCAATTGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCCACAAGCAAATCTGTGTACTTTGCACACTGCACATCAGAAATGATATTCATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCGTTACTGGCTGACACTTATGTAACCTTGTTGAAAGGCCGTAACGCTTGGTATGGCCAAATGTTGGCTAAGGGTCAATTAAGACCAGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAAGCATTCTTTGAACTTCTGAGCCAATCTAGCCTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTGGAGCTTTGTCCCATCTTGAAGACACTCTACAAAATTTTGATATCAAGGGAACAATCATCACAAGCTATTCTAAAAGCATTGAGGGATGAAAATCTGAATGATCCTCGCGAACGAATTGAGATTGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGACAGTCCTGA 1383 0.4396 MGVVHNAYSNGSVGGQNCNGVEEKLDALRRIIGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIHIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPLPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYKPSLLGQS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01777 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 134 268 - -
Phac1g01777 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 272 432 - -
Phac1g01777 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 272 426 IPR006109 GO:0005975|GO:0047952
Phac1g01777 460 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 272 IPR036291 -
Phac1g01777 460 Gene3D - 134 268 - -
Phac1g01777 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 22 103 - -
Phac1g01777 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 265 289 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phac1g01777 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 44 61 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phac1g01777 460 Gene3D - 272 432 IPR013328 GO:0016491
Phac1g01777 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 144 246 IPR011128 GO:0016616|GO:0046168|GO:0051287
Phac1g01777 460 Gene3D - 22 103 - -
Phac1g01777 460 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 272 427 IPR008927 -
Phac1g01777 460 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 38 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01777 Phac-Chr1 27359812 27364562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01777 9 459 Acyl Lipid Metabolism Gene Families AT2G41540 88.027 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01777 K00006 - gmx:100781512 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01777 1 27359812 27364562 Phac1g01777 1 27359812 27364562 ECH