Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01773 ATGTCGTCTTCCGCCGCGCTCCATTTCCAATCTCCGATAAATTCCGCGGACGCGCCGCCGCATTCTTCCTCCCTTCATTTCAACGCCGACTGCTTAAACCCTTCCGCCTCCGCCGCGCGCGCGAGGTCCCGACCGAGGCTCGCCAAACTCCGCAAGCAGTCCGCGTCTCAGCAGGCCAGGTCCCGGAACAGAGCTGGCGCCGACGACGATGGCGCCGGCGCCGGCTTCAATCCGTTTCGCGCCGATCAGGTATCTGGTAATGGTACTATATTAGAGAGTGGTTTTTTGAACTGTCGTGGTGACAATGGTTTTGTGTTTGGCGCTGGGAAGGTTGAGTCTGACTCCGCTAGGGATTTGAAGGGGGGAATTGGGAGTGGTGGTGTGGAATTTGTGTTTGGTGCTGGGAAGAGTGACGAGGGATTGAGAAAGAACGGTGAGAGTGTTACGGAGACGGTTTGTGGTGAGGGAGGGAAGGTGGGGTCGAATTCAGAGGGGGAGTTGAAGAGTGGGGTGTTTGTTTTTGGTGCTTCTAGAAATAATTTGAATTCTGGCTTGAGTACTGAAAAGGGGAAATGTAGTGTGGGGTTGGGGGATTCGGTTGCGGAGAGGGAATGTAAGTACGAATTTGAGTGTGGACAACGTGATTGCTTTGGGGGGAGCTATAGTGGTAGAGAGTCGAGCGTTAAGGTGGAGAAGAAAGAGCCCGTTGGCTGTGGGTGGAATTCGGATCGTGGAATGGGTGCTTTTGGTGTCAAGATGGGAATGAATGGTAATAGTGATACAGGTGCTGATCGGTATGATCATTTGGGTAATGGTGATAAGTGTAAGAGTGGATGTGGGAGTGCTAATGGTATTCCCGCTACTTATGGTGGCGTGCCAGTGCGTAATTTATCAGATGAGATGGAGAAACTTAACATTAAACATTCTGAGGGTGCTGATATTTCGAAGAATTCACATGCTAATGGTTGTGCTGCTGGTTTTGTTTTTGGAGGAAATGACATGGGTTTTGGTTATTCTAGTGTTAGTTCAAGAACCGAAACTGGTGGTCAGCAGTTCTGTGCTCATGCTGCTTCTGGGAACGTTGGTGTTCAAAATGGAACTGCTTGTGGTATTGCCTCGGATTCTACAGGAATACATTCTACGCCATCCACTAGTCAGAAAGGCTTCACAGATTTCCAGAGTGGCAAAATTCCTGGATGTTATGTGTCTGAAGATTCAAAAGCGAATGGAGCTGCAGTGTCATTTTCCTTCTCATCATTTGGTATTGATTCCCATCCAAATTTGTATGCTTCTACGGGCCATTCCTCGAGTGCAGATGGTGATAATAGCGATAATTTTTTTGCAAGTACTCCGGAGGCTTCCAAGGAGTCTTTTGCGGACTTCAAACCCCCAACATGGGATCCTTCTTGTTTCAAAGACAACTTATTTCCAAAGTTAAATAGAAAAGTTGAATCCACACAGAAAGGTCGATCATGTAAGGAAAAAGGATCAAAATGTACAAGGCGAAAATTGAAGCCTCATTCCTTAAACAAGAAACAGACAGGGCCGGATCATTTGTCAAAAGAAAACAGTTCACTCAAAACCCCTGATTCTTCTGGTGTCCACTCACCAATGGATTTTTCTCCCTATCAGGAAACAACAGCAAGTGGTCAAGATGTAAAAGCTTCTAAAGGATTAAACGATCTGCATTCAAAAATTCCTACTGATTATAAAGATGGAAACTTGCCTACCATGCGGAGAGAAGATACGAGTACAACTGATAGAAGACATGGAGATCTGGATAGTAATAAACTAGATGAAAATTTGTCTGTTCATTCTTCTGGCCCTGAGATGGTCTGGCCTAATTTGAAAACTGAGCAATTCTGCGGTAGTAGTGCAGAAGGAGCTTCAGCTTGTGCTGGTGTTGATTTCACCTCAAACATTGAAAGGCAAAAGGATGCTACTTTTTGTTTTGTTCCTGGTCTGAATGAATCCACGGGCAAAGATTTTTCGTTTGCATCTTCATCGGTGGTTGGTACTCCATCATTAAAGCGTCAACATAAGAAGAAATTTAGGAGAAAAGGGGGGTGCAACACTTTTGTTATCTCTCCTCGTGTGAATGGGAAGTTTGTATCTTCTGTACAATTTTCACCACATAGCACTGCCAACATGTCATCACATTCTGATGTGATGGATAGATCTCAGATAAATGGCCAGTGCAAGGATGGGGATGTTGCATCATCAAATACAATTCCGTCATCAGCCTGTGACAAGTGGAGACTCAGGGGGAACCAGGCCCATAAAGATGGGGATCTTTCTAAAGCTGAGGGTTTCTACACACTAGGAATAAATTCTGTACCTACAAGTGAAAGATCTGGATGCTTGGTTCAGCCTCTTTTACTATGCTATAGTAATCGTGCAGCAACACGGATGAGTCTTGGAAGGATTAGAGAGGCTCTTGAAGATTGCGTGATGGCTACAGCTCTGGACCCTTCTTTTCCAAAAGTACAGATGAGAACTGCTAACTGCCACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCAGTGTTTTAACAAGTGCATGGAATCAGGTAGTGTTATTTGTTTGGATCGGAGGGTTATAGTTGAAGCAGCTGATGGTTTGCAAAAGGCTCAGGAAGTTCTTAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACAGCTTTGGAACTAGTTTCTAAGGCATTGTCTATAAGTTTGTACTCAGAAAAATTGCTGCAAATGAAGGCAGAGGCTCTATGTTTGCTACGAAAGTATGAAGCAGCAATTCAGCTTTGTGAACAAAGTCAGCATCTTGCAGAGAAAAATTTTGTCTTGGAAAACAATGCTGCAAATTCTGATAGTTCCTTATGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGATATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAGGCATCACTTAATGTTCTAGATCAATTACAGCATGTTGTGTCTGTCACTGACAAGTCTGTGATTGATAATACTGAAGACTCATTATCGTTAGCTTCTACAATAAGAGAACTTCTAGACCACAAGAAGGCAGGGAATGAAAACTTTAAAAAGGGAAAGTATACAGAAGCTGTAGAGAATTACACTGCTGCTCTGTCATGCAATATTAAATCATGTCCTTTTATGGCAATATGTTTCTGCAACCGTGCTGCTGCTCATCAAGCGTTGGGCCAAATTGCTGATGCCATTGCAGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGGGATCTCATTGATCTCATTTTGTAGGCAATTTCAAGAAGAGCCACCTTACTTGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTTAAGAGACTTATAG 3405 0.4391 MSSSAALHFQSPINSADAPPHSSSLHFNADCLNPSASAARARSRPRLAKLRKQSASQQARSRNRAGADDDGAGAGFNPFRADQVSGNGTILESGFLNCRGDNGFVFGAGKVESDSARDLKGGIGSGGVEFVFGAGKSDEGLRKNGESVTETVCGEGGKVGSNSEGELKSGVFVFGASRNNLNSGLSTEKGKCSVGLGDSVAERECKYEFECGQRDCFGGSYSGRESSVKVEKKEPVGCGWNSDRGMGAFGVKMGMNGNSDTGADRYDHLGNGDKCKSGCGSANGIPATYGGVPVRNLSDEMEKLNIKHSEGADISKNSHANGCAAGFVFGGNDMGFGYSSVSSRTETGGQQFCAHAASGNVGVQNGTACGIASDSTGIHSTPSTSQKGFTDFQSGKIPGCYVSEDSKANGAAVSFSFSSFGIDSHPNLYASTGHSSSADGDNSDNFFASTPEASKESFADFKPPTWDPSCFKDNLFPKLNRKVESTQKGRSCKEKGSKCTRRKLKPHSLNKKQTGPDHLSKENSSLKTPDSSGVHSPMDFSPYQETTASGQDVKASKGLNDLHSKIPTDYKDGNLPTMRREDTSTTDRRHGDLDSNKLDENLSVHSSGPEMVWPNLKTEQFCGSSAEGASACAGVDFTSNIERQKDATFCFVPGLNESTGKDFSFASSSVVGTPSLKRQHKKKFRRKGGCNTFVISPRVNGKFVSSVQFSPHSTANMSSHSDVMDRSQINGQCKDGDVASSNTIPSSACDKWRLRGNQAHKDGDLSKAEGFYTLGINSVPTSERSGCLVQPLLLCYSNRAATRMSLGRIREALEDCVMATALDPSFPKVQMRTANCHLLLGEVENAQQCFNKCMESGSVICLDRRVIVEAADGLQKAQEVLKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLLRKYEAAIQLCEQSQHLAEKNFVLENNAANSDSSLCDSYSSVKLWRWSLISKCYFRLGRLEASLNVLDQLQHVVSVTDKSVIDNTEDSLSLASTIRELLDHKKAGNENFKKGKYTEAVENYTAALSCNIKSCPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKGISLISFCRQFQEEPPYLRWLEIMNKQLVTLRDL* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01773 1134 MobiDBLite consensus disorder prediction 1 79 - -
Phac1g01773 1134 Gene3D Tetratricopeptide repeat domain 1026 1114 IPR011990 GO:0005515
Phac1g01773 1134 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3 1103 - -
Phac1g01773 1134 SMART tpr_5 917 950 IPR019734 GO:0005515
Phac1g01773 1134 SMART tpr_5 749 782 IPR019734 GO:0005515
Phac1g01773 1134 SMART tpr_5 1065 1098 IPR019734 GO:0005515
Phac1g01773 1134 SMART tpr_5 1027 1060 IPR019734 GO:0005515
Phac1g01773 1134 SMART tpr_5 793 826 IPR019734 GO:0005515
Phac1g01773 1134 SMART tpr_5 827 860 IPR019734 GO:0005515
Phac1g01773 1134 SUPERFAMILY TPR-like 1028 1112 IPR011990 GO:0005515
Phac1g01773 1134 MobiDBLite consensus disorder prediction 482 610 - -
Phac1g01773 1134 Gene3D Tetratricopeptide repeat domain 742 899 IPR011990 GO:0005515
Phac1g01773 1134 MobiDBLite consensus disorder prediction 495 509 - -
Phac1g01773 1134 MobiDBLite consensus disorder prediction 1 31 - -
Phac1g01773 1134 MobiDBLite consensus disorder prediction 564 599 - -
Phac1g01773 1134 SUPERFAMILY TPR-like 750 954 IPR011990 GO:0005515
Phac1g01773 1134 MobiDBLite consensus disorder prediction 519 554 - -
Phac1g01773 1134 Coils Coil 874 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01773 Phac-Chr1 27313699 27322614 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01773 K09527 - gmx:100809278 1441.02