Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01715 ATGGCAGCTGAGAATGGGTTCCAGTGGGAGAGAGTGGGAGGAGAAGGAGCAGAACAAGAAGGAGCAGAGCAAGAAGAAACAGAACAAGTCAAAGGGTGTTTGAGCAAGTTCATCGATGATGGCACCGTTGAAAGTCACAGATACTACTTGTCTCGCAGAACCACTCTGGAAATGCTCAAAGACAGAGGCTACTCCATTCCCTCCAACGAAATCGACCTTTCTCTCTCCCAATTCCGCCACATGCACGGCCATTCCCCCGACCCTGACCGTCTCCGCCTCTCCCTCGCTCACGCGACTAACCCTTCCAAAAGGATTTTAGTCATTTTCTGTGGGTCAGGTGTTGTGAAAGTTACTGCTATTCGGAACATTGCGGGGCAGATTGTTAATAGAGATACTTTGAGTGGTCTTATATTGATAGTGGAAAATCATGTTACTAGCCAGGCCTTGAAAGCGGTCGGTCTTTTTTCCTTCAAGGTTGAAATTTTCCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTGTTGAAGCCAAAGCATCAGGTGCTGACTGATAGGCAGAAGAAAAATCTCCTTAAGAAATTCAATATCGAAGAAAAGCAGCTTCCCCGCATGCTACAGACTGATGCAATTGCACGATATTATGGACTTGAGAGGGGCCAAGTAGTTAAAGTTACCTATAGTGGTGAAATCACCCAGATGCATGTCACTTATCGATGTGTGTGGTGA 729 0.4568 MAAENGFQWERVGGEGAEQEGAEQEETEQVKGCLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLRLSLAHATNPSKRILVIFCGSGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01715 242 PIRSF RPB5 37 242 IPR014381 GO:0003899
Phac1g01715 242 Gene3D - 39 166 IPR036710 GO:0003677|GO:0003899|GO:0006351
Phac1g01715 242 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 42 242 IPR014381 GO:0003899
Phac1g01715 242 SUPERFAMILY RPB5-like RNA polymerase subunit 167 242 IPR035913 -
Phac1g01715 242 Gene3D - 167 242 IPR035913 -
Phac1g01715 242 Pfam RNA polymerase Rpb5, C-terminal domain 169 241 IPR000783 GO:0003677|GO:0003899|GO:0006351
Phac1g01715 242 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 43 170 IPR036710 GO:0003677|GO:0003899|GO:0006351
Phac1g01715 242 MobiDBLite consensus disorder prediction 1 29 - -
Phac1g01715 242 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 167 242 - -
Phac1g01715 242 Pfam RNA polymerase Rpb5, N-terminal domain 44 126 IPR005571 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01715 Phac-Chr1 26277770 26282446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01715 K03013 - gmx:100306033 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01715 1 26277770 26282446 Phac1g01715 1 26277770 26282446 ECH