Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01714 ATGGTGTGCGCGCTTGTGGACGCCAAAATGGGAAGCTTCTGGGAGTCCATCGGAAACTTCTTCAACGGCGGCGAACAGATCCCGTGGTGCGACCGTGACGTCATTGCTGGCTGTGAGAGAGAAATTGCAGAGGCTGCTAATGGTGACTCTGAGGAGCGGAAGAATGAGAGTATTATGAGGTTGTCATGGGCTCTTGTTCATTCAAGGCAAAAGGAAGATGTTCAGCGAGGGATAGCCATGCTTGAAAGTACTCTTCTTTGGGCAATGATAAAAGTCCTTTGCAACAAAGAGAGAAGTTTTATCTTCTGGCTGTTGGTTACTATAGAAGTAATGACTATGGAAGGAGCCGGCAGCTTGTGGATCAATGTTTGCAGGAATGTCAAGACCCACCGTTGTTATCCTTATGAGATATCCAGTACCCACTGTTTTGATTCTATGCTGGGAGATGGTGTAATAGGAATTGGCATCACTGCAACAGCTGTGGGACTTGTAATTGGTGGCATTGCTACCGCATTTGCCCGGAGGACTTGA 531 0.4746 MVCALVDAKMGSFWESIGNFFNGGEQIPWCDRDVIAGCEREIAEAANGDSEERKNESIMRLSWALVHSRQKEDVQRGIAMLESTLLWAMIKVLCNKERSFIFWLLVTIEVMTMEGAGSLWINVCRNVKTHRCYPYEISSTHCFDSMLGDGVIGIGITATAVGLVIGGIATAFARRT* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01714 176 Gene3D Tetratricopeptide repeat domain 29 98 IPR011990 GO:0005515
Phac1g01714 176 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 11 85 IPR016543 GO:0000266
Phac1g01714 176 Pfam Fis1 N-terminal tetratricopeptide repeat 56 83 IPR028058 -
Phac1g01714 176 SUPERFAMILY TPR-like 15 85 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01714 Phac-Chr1 26272971 26276685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01714 K17969 - gmx:100785425 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01714 1 26272971 26276685 Phac1g01714 1 26272971 26276685 ECH