Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01685 ATGGCTCAAGTTCTTCTATATCGCCCTCCTCTGCTACGCTTCATGTCTTCTCGCTTCTTCACCTGCTCTTCCTTCCATACGCGTTTTTCTTCTCTCCCTCCTTCTACTCTCACCAAAACCAGGACGAGTTTTCATCTGAGAAAAATCTGGGTTCCCTGTTCGGTTCCAATTGCGGCTACTCCAAGGGCGTTTATGTCTTCTGTCCCTACCACTGAAGCTTTTCAGAAAAGTGAAAGTTCCACAGCTTATGGTTCTGATCAAATTCAGGTGCTTGAAGGCTTGGACCCTGTGAGGAAAAGGCCCGGGATGTACATTGGAAGCACCGGCCCTCGAGGGTTGCACCATTTGGTGTATGAAATTTTGGATAATGCTGTTGATGAAGCTCAAGCTGGGTTTGCTTCCAGGATTGATGTTGTTTTGCTTGCAGATGATTCTGTGAGCATCACCGACAATGGTCGTGGGATTCCTACTGACTTGCATCCAGTTACTAATAAATCTGCCTTGGAGACAGTGTTGACGGTCTTGCATGCTGGTGGAAAATTTGGTGGTGCCAACAGTGGGTACTCTGTTTCAGGAGGTTTGCATGGCGTTGGTTTGTCTGTTGTTAATGCCTTGTCAGAGTCACTGGAGATAACAGTTTGGCGTGATGGAATGGAATACACACAAAAATATTCTCGTGGAAAGCCAGTGACAATTCTAAAATGCCTTGTGCTTCCAGATGAAAAGAAAGATTTTCGAGGGACACGTGTTAGATTTTGGCCCGACAAAGAAGTTTTCACCACTGCTATTCAGTTTGATTACAACACAATAGCTGGACGGATTAGGGAATTAGCTTTCCTCAACCCAAAGCTTACAATCACACTTCAGAAAGAGGATAATGATCCAGATAAAGCTCAGTATAACAAATATTTCTATGCTGGGGGGTTGGTTGAATATGTGAAATGGCTCAATGCAGATAAGAAAACTCTTCATGATGTTCTGAGTTTTAGAAAAGAAACTGATGGCATCACAGTTGATATAGCTTTTCAATGGTGTGAAGATGCATATTCAGATACAATTCTGGGATATGCTAATAGTATACGCACTATTGATGGTGGGACTCATATTGAGGCCATGAAGGCTTCTATAACAAGAACACTGAATGGTCTAGGAAAGAAGTCAAAAGTTATTAAGGATAAGGATATTACTTTAAGTGGTGAGCATGTTAGAGAGGGTCTAACATGTGTTGTCTCAGTCAAGGTCCCAAACCCTGAGTTTGAAGGACAAACAAAGACAAGGTTAGGAAATCCAGAGGTGCGAAAAGTGGTTGATCAATCTATTCATGACTATCTTACTGAGTATTTAGAATTGCATCCCGATGTGCTTGATTCAATACTTTCTAAATCTCTTAATGCTTTTAAGGCAGCTCTGGCAGCAAAAAGAGCAAGAGAATTGGTGAGACAAAAGAGTGTATTGAGATCTTCATCTCTTCCAGGAAAACTAGCTGATTGTTCATCTTCAAATCCTGAAGATTGTGAAATATTTATAGTTGAAGGTGATTCAGCTGGAGGAAGTGCTAAGCAAGGGCGTGACAGGCGCTTCCAGGCCATTCTCCCTCTGAGGGGTAAGATTCTGAATATTGAAAGGAGGGATGAAGCAGCAATGTACAAAAATGAAGAGATCCAAAATTTAATTCTGGGTCTTGGTCTCGGTGTGAAGGGAGAGGATTTTAAAAAGGATGCACTCCGGTATCATAAGATTATTATTTTGACTGATGCTGATGTGGATGGTGCTCACATTCGAACTTTGCTACTGACATTTTTCTTCAGATATCAGAAAGCTTTGTTTGATGAAGGTTGTATTTATGTTGGTGTTCCACCGTTATACAAGGTTGTCAGGGGAAAACAAGTGCACTATTGCTATGATGATGCTGACCTTAAAAAGCTTAAAAGATCATTCCCTCCTAATGCATCGTACAACATGCAAAGGTTCAAAGAAATACACCTGTGGGTCCCCCTCACCCCTTTTTAA 2010 0.4169 MAQVLLYRPPLLRFMSSRFFTCSSFHTRFSSLPPSTLTKTRTSFHLRKIWVPCSVPIAATPRAFMSSVPTTEAFQKSESSTAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASRIDVVLLADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYTQKYSRGKPVTILKCLVLPDEKKDFRGTRVRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLQKEDNDPDKAQYNKYFYAGGLVEYVKWLNADKKTLHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYANSIRTIDGGTHIEAMKASITRTLNGLGKKSKVIKDKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIHDYLTEYLELHPDVLDSILSKSLNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLKRSFPPNASYNMQRFKEIHLWVPLTPF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01685 669 Pfam Toprim domain 506 607 IPR006171 -
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 307 329 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 461 481 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 83 93 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 279 292 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 399 415 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 447 461 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 264 279 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 PRINTS DNA gyrase subunit B signature 557 566 IPR000565 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 FunFam DNA topoisomerase 2 494 615 - -
Phac1g01685 669 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 83 294 IPR036890 -
Phac1g01685 669 SUPERFAMILY Type II DNA topoisomerase 482 658 IPR013760 GO:0003918|GO:0005524
Phac1g01685 669 CDD HATPase_GyrB-like 113 297 - -
Phac1g01685 669 FunFam DNA gyrase subunit B 80 306 - -
Phac1g01685 669 CDD TOPRIM_TopoIIA_GyrB 505 619 IPR034160 -
Phac1g01685 669 SUPERFAMILY Ribosomal protein S5 domain 2-like 308 478 IPR020568 -
Phac1g01685 669 Gene3D - 483 663 IPR013759 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 Pfam DNA gyrase B 308 477 IPR013506 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 FunFam DNA gyrase subunit B 307 479 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 592 609 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 612 624 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 147 160 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 112 127 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 355 368 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 192 206 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 507 521 - -
Phac1g01685 669 PRINTS DNA topoisomerase II family signature 574 590 - -
Phac1g01685 669 CDD TopoII_Trans_DNA_gyrase 307 464 - -
Phac1g01685 669 PANTHER DNA GYRASE/TOPOISOMERASE SUBUNIT B 74 660 - -
Phac1g01685 669 SMART HKATPase_4 108 258 IPR003594 -
Phac1g01685 669 Gene3D - 307 482 IPR014721 -
Phac1g01685 669 ProSiteProfiles Toprim domain profile. 505 612 IPR006171 -
Phac1g01685 669 SMART topII5 112 665 IPR001241 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 110 257 IPR003594 -
Phac1g01685 669 ProSitePatterns DNA topoisomerase II signature. 509 517 IPR018522 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Phac1g01685 669 Gene3D - 80 306 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01685 Phac-Chr1 25637585 25654072 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01685 K02470 - gmx:100807172 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01685 1 25637585 25654072 Phac1g01685 1 25637585 25654072 ECH