Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01681 ATGTGGGCTCTTCGTCGAGCTTCCATCCCTCTCAGGATCCGAGGGTATAATGTGAGAACTTCTTTTCTCCAATTAGCGCCAACTAATTGTGTGGAAGAAGAGAGTGGTATCACTGAGTCTCATGGAATAACTAATGGTGGACTGTTGCTGTGCAATACGCGTTTTTATTCGGGGCAAAGTGCATCACTGGATTTTACTGTGTGGAGACGCGAACTTTGTTCTAGTAGCACCAAAGAAGATGATGATTTGGAGGATGGGTTTTCCGAGCTGGAGACACCTGCTGGCGATGGAAATGAAATTGACAGTCTTTTAGCTTCTGATGCCGACCAATCGGATGACGATGGTGACAGGGAGAATGTAGAGGAGCCTCACAACGAGGTTGATGAGGTGGTCAAGGAGAAAGGAAAACCGCGTCGTGGAAGGGTTGAATCTGAACTATTAAAGGAGATCATGAATGTTCCGGGTGTGTCTATTCATCTGGCTCTGGAGAAGTGGTTAGCAGAAGGGAATGAACTAACCAGAGAGGAGGTGTCACATGCCATGTTTTATCTTCGAAGGCGAAAGATGTTTGGGAGAGCTTTGCAGCTCTCAGAGTGGCTCGAGTCAAAAAATCAGTTTGAGTTTCTTGAAAGAGATTATGCGGTTCGCCTTGATTTAATTGCCAGAACACGTGGCTTACATAAGGCAGAGGTTTACATTGAGACTATTCCAGAATCTTGTAGTAGAGAGATAATGCATCGGACTTTATTGGCTAACTGTGTCAGTCAGAACAATGTGAAGAAAGCAGAGGAAGTTTTCAATAAAATGAAGAATTTGGACCTTTCTATTACAATATTTGCTTGCAATCAGATGTTACTTTTGTATAAGAGGAATAACAAGAAGAAAATAGCTGATGTGTTATTGTTGATGGAAAATGAGAATATGAAACCTTCTTCTCTTACTTATTCAATCTTAATAGACACAAAAGGCCAGTCCAGAGATATTGATGGAATGGATCAAATTCTTGATAGAATGAAAGCTCAAGGCATTGAACCAGACATCAAAACACAGGCTGTTTTGGCTAGGCACTACATCTCAGCTGGGCTTCAAGATAAAGCTGAAACCTTATTGAAGGAGATGGAAGGTGAAAACTTAAACCGGAATCGGTGGCTATGCCGAATTTTGCTTCCCCTCTACGCCAACTTAGGAAAGGTGGATGAAGTGGAAAGAATTTGGAAGGTCTGTGAGACAAACCCTTGGCATGATGAGAGTCTTGTGGCAATTGAAGCTTGGGGAAAGTTGAATAAGGTTGATGAAGCAGAGAATGTTTTTGAGACAATGATAAAGAAAAGGAAGCTTTCTTCCAGGACCGGCTCTGTACTACTGAAGGTTTATGCAAATCATAACAAGCTAATTAAGGGTAAGGATCTCATTAAGCGAATGGGAGATAGCGGGTGCCGAATAGGCCCACTTAGCTGGGATGCAATGGTGAAACTATATGTCCAAGCCGGGGAAGTGGAGAAGGCAGACTCTATTCTTCACAGGGCAGCCCAGCAGAGTCAGATGAAGCCGATGTTTTCCACCTACCTAACTATTTTGCAGCAGTATGCTGAGAGGGGTGACATTCATAACTCAGAAAAGATTTTCTATAGAATGAAACAAGATGATTATCCATCTAGACCAAGGATGTACCAACTTCTATTGAACGCCTATATAAATGCAAAGGTTCCAGCCTATGGGATTAGGGACAGGTTAAGAGCTGATAGCATATTGCCCACTAAAACTTTGGCATACCAGTTGACTCAAGTTGATGGATTTAGGAAGAATTCAGTCTCCGATTTGCTTGACTGA 1830 0.4246 MWALRRASIPLRIRGYNVRTSFLQLAPTNCVEEESGITESHGITNGGLLLCNTRFYSGQSASLDFTVWRRELCSSSTKEDDDLEDGFSELETPAGDGNEIDSLLASDADQSDDDGDRENVEEPHNEVDEVVKEKGKPRRGRVESELLKEIMNVPGVSIHLALEKWLAEGNELTREEVSHAMFYLRRRKMFGRALQLSEWLESKNQFEFLERDYAVRLDLIARTRGLHKAEVYIETIPESCSREIMHRTLLANCVSQNNVKKAEEVFNKMKNLDLSITIFACNQMLLLYKRNNKKKIADVLLLMENENMKPSSLTYSILIDTKGQSRDIDGMDQILDRMKAQGIEPDIKTQAVLARHYISAGLQDKAETLLKEMEGENLNRNRWLCRILLPLYANLGKVDEVERIWKVCETNPWHDESLVAIEAWGKLNKVDEAENVFETMIKKRKLSSRTGSVLLKVYANHNKLIKGKDLIKRMGDSGCRIGPLSWDAMVKLYVQAGEVEKADSILHRAAQQSQMKPMFSTYLTILQQYAERGDIHNSEKIFYRMKQDDYPSRPRMYQLLLNAYINAKVPAYGIRDRLRADSILPTKTLAYQLTQVDGFRKNSVSDLLD* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01681 609 Gene3D Tetratricopeptide repeat domain 241 421 IPR011990 GO:0005515
Phac1g01681 609 MobiDBLite consensus disorder prediction 78 138 - -
Phac1g01681 609 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Phac1g01681 609 SUPERFAMILY TPR-like 343 553 IPR011990 GO:0005515
Phac1g01681 609 Pfam Pentacotripeptide-repeat region of PRORP 247 404 IPR033443 -
Phac1g01681 609 Gene3D Tetratricopeptide repeat domain 422 607 IPR011990 GO:0005515
Phac1g01681 609 Pfam PPR repeat 485 508 IPR002885 -
Phac1g01681 609 Pfam PPR repeat 453 479 IPR002885 -
Phac1g01681 609 Pfam PPR repeat 520 548 IPR002885 -
Phac1g01681 609 Pfam PPR repeat 421 443 IPR002885 -
Phac1g01681 609 NCBIfam pentatricopeptide repeat 245 276 IPR002885 -
Phac1g01681 609 NCBIfam pentatricopeptide repeat 314 347 IPR002885 -
Phac1g01681 609 PANTHER OS12G0527900 PROTEIN 72 586 - -
Phac1g01681 609 MobiDBLite consensus disorder prediction 117 138 - -
Phac1g01681 609 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 418 603 - -
Phac1g01681 609 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 242 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01681 Phac-Chr1 25613860 25621083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01681 150 547 EF-hand Containing Proteins AT1G02150 23.601 1.94e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01681 - - gmx:100500196 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01681 1 25613860 25621083 Phac1g01681 1 25613860 25621083 ECH