Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01597 ATGATTTTTGTAAAGGCTTGTTGCAGTTTTCTTTGGACATACCTTATTATAGGGGCATGTTTTGCTTTTCGATGTTATGCTGATGCTAACCAGACTACAACTCTGGTTGTAGATGCTTCTGATTCTGGAAGGCCAATTCCTGACACTCTTTTCGGAATATTTTTTGAGGAGATCAATCATGCTGGTACTGGTGGTTTGTGGGAAGAACTTGTGAACAACAGAGGTTTTGAAGCTGGGGGAACACGAGTTCCATCAAATATTGCACCCTGGACTATAGTTGGGAAAGAACCAGCCATTTTCCTACAAACTGAACTTAGCTCTTGCTTTGAACACAACAAGGTTGCATTGAAAATAGATGTGCAGTGTGACAATTGCCCTTCTGATGGTGTTGGTGTCTCTAACCCTGGTTTTTGGGGCATGAATATTGTGGAAGGGAAGAAATACAAAGTTGTCTTCTTTGTTAAATCAAAAGGAGCACTAGATATGACAGTATCATTCAGAGAAACTGAAGGTGGAAGGATATTGGCTTCTAGCAATATCATTGCTTCTGCATCAGAAGTTTCAAATTGGAAAAGGATGGAGACTATATTAGAAGCTGATGCATCAAGTTCCGACTCAAGTCTGTATTTAACAACAACCAAAAAAGGGATTACATGGTTGGACCAAGTGTCTGCTATGCCTGTGGACACATACAAGGGACATGGTTTCCGAAGTGACTTGGTTAACATGCTAATAGACTTGAAACCAGCCTTTTTAAGATTTCCAGGTGGCTGTTTTATTGAAGGGCAAAGATTAAAAAATGCATTTCGGTGGAAAAATAGTGTTGGACCCTGGGAACAGAGACCTGGCCATTTTGGTGATGTTTGGAGTTATTGGACAGACGATGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCATTGTGGGTGTTTAATGGTGGCATAAGCCATACTGAAGAAATTGATACAAAGGACATCACACCTTTTGTGCAAGAAAGCCTTGATGGTATTGAGTTTGCAAGAGGTGCAGCTACTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGGCACCCAGACCCATTTGACCTAAAATATGTTGCTGTTGGAAATGAAGATTGCCAGAAGAAAAACTACCAAGGAAACTACCTAGCTTTCTACAAGGCAATAAAAGCTGCTTATCCAGACATTCAAATAGTTTCAAACTGTGATGCTTCATCCAAACCATTAAATCACCCAGCAGATATGTATGATTATCACACTTATCCTAAGGAATATCAAACTATGTTTAATAACGCTGATGTGTTTGATAAAACACCACGAAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGAACAAGCTAAGCAGGGAACCCTTTTGGGAGCTGTATCAGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCACCACTTTTTGTGAATGCAAATGACAGGAAGTGGAACCCAGATGCAATTGTTTTTAGTTCCAATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGTTTATGTTTAGAGAGTCAAATGGAGCAACACTCCTCAAATCACAACTTCAAACACCTGACCCTAATTCAGTTGCTGCATCTGCAATTATCTGCAAAAATTCCCAAACTTACTTGAAAATAAAGGTTGCAAACGTTGGGAAGAGCCCAATAAATCTCAAGATTTCTCTGAAAGGAATTGAGAGTTCAGATGCAACAAAGGCAACAAAGACAGTGCTCACATCTGCAGATGCATTCGATGGGAACAGCTTTGCAAACCCAACAAAGATAGTACCAAAACGAAATCCACTTATGAGTGCTGGCAAAGAGATAAATGACATACTTCCACCAGTTTCATTTACAGTATTTGATTTATTGATTAGAAGACCATAA 1947 0.3986 MIFVKACCSFLWTYLIIGACFAFRCYADANQTTTLVVDASDSGRPIPDTLFGIFFEEINHAGTGGLWEELVNNRGFEAGGTRVPSNIAPWTIVGKEPAIFLQTELSSCFEHNKVALKIDVQCDNCPSDGVGVSNPGFWGMNIVEGKKYKVVFFVKSKGALDMTVSFRETEGGRILASSNIIASASEVSNWKRMETILEADASSSDSSLYLTTTKKGITWLDQVSAMPVDTYKGHGFRSDLVNMLIDLKPAFLRFPGGCFIEGQRLKNAFRWKNSVGPWEQRPGHFGDVWSYWTDDGFGYFEGLQLAEDIGARPLWVFNGGISHTEEIDTKDITPFVQESLDGIEFARGAATSKWGSLRASMGHPDPFDLKYVAVGNEDCQKKNYQGNYLAFYKAIKAAYPDIQIVSNCDASSKPLNHPADMYDYHTYPKEYQTMFNNADVFDKTPRNGPKAFVSEYALIGEQAKQGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRKWNPDAIVFSSNQVYGTPSYWVQFMFRESNGATLLKSQLQTPDPNSVAASAIICKNSQTYLKIKVANVGKSPINLKISLKGIESSDATKATKTVLTSADAFDGNSFANPTKIVPKRNPLMSAGKEINDILPPVSFTVFDLLIRRP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01597 648 SUPERFAMILY Glycosyl hydrolase domain 520 642 - -
Phac1g01597 648 SMART alpha_l_af_c 454 637 IPR010720 GO:0046373|GO:0046556
Phac1g01597 648 Pfam Alpha-L-arabinofuranosidase C-terminal domain 455 637 IPR010720 GO:0046373|GO:0046556
Phac1g01597 648 Gene3D - 529 643 IPR013780 -
Phac1g01597 648 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Phac1g01597 648 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 645 - -
Phac1g01597 648 Gene3D Glycosidases 223 528 - -
Phac1g01597 648 FunFam Alpha-L-arabinofuranosidase 1 223 530 - -
Phac1g01597 648 SUPERFAMILY (Trans)glycosidases 205 537 IPR017853 -
Phac1g01597 648 Gene3D - 67 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01597 Phac-Chr1 23878398 23883700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01597 15 648 Glycoside Hydrolase AT3G10740 59.601 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01597 K01209 - gmx:100780771 1070.84