Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01592 ATGGCGTTTTGTTGTTCAAAAGTTTCATTACATGTTATATTATATTATTTATTCGCCATTTATTTTCTTAGTTCTGAGAATTGCTGTGTTGATGCACACTCAACCCACTCAACCCTAGTTGTGCATGCTGCTAATAATGTGTCTTCAAGAACAATTCCTAACACTTTCCTTGGAGTATTTGTTGAGGAAATTAATCATGCGTGTGCTGGGGGACTATGGGCAGAACTTGTCAGTAATAGAGGGTTTGAAGCTGGAGGCCCGAACAACACCTTCAATATTTATCCTTGGTCAATTATAGGAAACAAATCATCCATTTCTGTATCAATTAACTATAGCTCATGCTTTAAACGTAATAAAGCTGCATTACAAATGGAGGTGTATTGTAGTGATCACAACCCTTGTCCAATTGGTGGCGTTGGTATTTCTAACCCTGGTTATTGGGGCATGAATATCGAGCAAGGAAAATGGTACAAGGTGGTCTATCATGTTAAATCAGAAGGAAAGTTTGATTTTCAACTTTCATTCACGGGTGTTGATGTTATAAAGATGGCATCAAATATCACACAAGTTTCTGAAGATGGAAAATGGAAAAGGGTGGAGACAGTGGTGGAAGCAAACGCTACCAATCACTATTCAAGTCTTCAAATAACCACAACCAATGAAGGAAGTTACTTGTTAGACCAAGTGTCAGTGATGCCATTGGACACTTACATGGGTCATGGCTACCGAAAGGATCTTTTTCAAATGGTGGCTGATTTGAAACCAAAATTTGTCAGATTTCCTGGTGGAACGTATGTTGAAGGAGACTATCTCAAGAATCACTATATGTGGAAAGATACAATTGGACCATGGGAAGAGAGACCAGGACACTACAATGATATTTGGAACTATTGGAGTGATGATGGAATTGGTTATTTAGAGTATCTCCAACTAGTAGAGGACCTTGGTGCATTGCCCATATGGGTGTTCAACGCTGGCTTCAGTCGTCATGAAGAAATTAATACAACAAATTTAGCACCTTATGTGCAAGATGCCCTTGATGGCATTGAATTTGCAAGAGGGTCTCCTGAATCAAAATGGGGTTCTGTTAGAGCTAGATTGGGACATCCAAAACCATTTGATTTGAGATATGTTGCCATTGGAAATGAAGATTGTGAGTTTTCGAATTATCAAGGAAATTACCTTAAGTTCTATGATGCTATAAAATTTGCCTACCCAGATATGAAAATGATCTCAAATTGTGATGCTTCTAGCACACCATTAAACCATCCAGCTGATTTGTTCGATTTTCATATTTATACAAACTCGACGGACTTATTTTCTAAGTCTACTCAATTCGATCACACGTCACGATCTGGACCAAAGGCTTTTGTGAGTGAGTATGCTGTATGGAGACAAGATGCTGCAAATGGAAGTCTTCTGGCTGCTTTGGCAGAAGCTGCATTTCTTATTGGCCTAGAAAAGAACAGTGATGTTGTCGACATGGTTTCTTATGCACCACTTTTCTCAAATATAAACGACAGGAAATGGATCCCCGATGCAATTGTGTTCGACTCTTATCAGCTCTATGGAACACCTAGCTATTGGGTGCAAAAGCTTTTTATTGAGTCTAGTGGAGCAAAATTTATTCACTCAAAACTTAAAACAGCTTCATCTAATAAACTTATTGCATCTGCAATTAGTTGGCAAAATTCTCCATATGAGAAAAAATACATAAGAATAAAGGTAGTGAACTTCGGAGCAGCCACAGAGACACTTCACATACGCATACATGGGTTCTCAAAAACGCAACTATTTCGTTCTGTAAAAACAGTGATTACATCAACCAACGTAATGAATGAGAATTCTTTCTCACAGCCTACCAAGGTGGTGCCACAAACAAGTTCTGCAGTGAATGTTAAAAGGAAGATACATGCAATTGTTTCTCCCTATTCAGTCACATCATTTGATTTGTTAGTTTATTAG 1965 0.3822 MAFCCSKVSLHVILYYLFAIYFLSSENCCVDAHSTHSTLVVHAANNVSSRTIPNTFLGVFVEEINHACAGGLWAELVSNRGFEAGGPNNTFNIYPWSIIGNKSSISVSINYSSCFKRNKAALQMEVYCSDHNPCPIGGVGISNPGYWGMNIEQGKWYKVVYHVKSEGKFDFQLSFTGVDVIKMASNITQVSEDGKWKRVETVVEANATNHYSSLQITTTNEGSYLLDQVSVMPLDTYMGHGYRKDLFQMVADLKPKFVRFPGGTYVEGDYLKNHYMWKDTIGPWEERPGHYNDIWNYWSDDGIGYLEYLQLVEDLGALPIWVFNAGFSRHEEINTTNLAPYVQDALDGIEFARGSPESKWGSVRARLGHPKPFDLRYVAIGNEDCEFSNYQGNYLKFYDAIKFAYPDMKMISNCDASSTPLNHPADLFDFHIYTNSTDLFSKSTQFDHTSRSGPKAFVSEYAVWRQDAANGSLLAALAEAAFLIGLEKNSDVVDMVSYAPLFSNINDRKWIPDAIVFDSYQLYGTPSYWVQKLFIESSGAKFIHSKLKTASSNKLIASAISWQNSPYEKKYIRIKVVNFGAATETLHIRIHGFSKTQLFRSVKTVITSTNVMNENSFSQPTKVVPQTSSAVNVKRKIHAIVSPYSVTSFDLLVY* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01592 654 Gene3D - 536 652 IPR013780 -
Phac1g01592 654 Pfam Alpha-L-arabinofuranosidase C-terminal domain 460 645 IPR010720 GO:0046373|GO:0046556
Phac1g01592 654 Gene3D - 73 228 - -
Phac1g01592 654 SUPERFAMILY (Trans)glycosidases 214 540 IPR017853 -
Phac1g01592 654 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 14 652 - -
Phac1g01592 654 SMART alpha_l_af_c 459 645 IPR010720 GO:0046373|GO:0046556
Phac1g01592 654 FunFam Alpha-L-arabinofuranosidase 1 229 535 - -
Phac1g01592 654 Gene3D Glycosidases 229 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01592 Phac-Chr1 23834515 23839183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01592 13 652 Glycoside Hydrolase AT3G10740 58.025 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01592 K01209 - gmx:100787734 937.562