Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01540 ATGGATCTGGATGGAATGGCTAAAATCTCCATGTTGTTGGTGGGGCTTTATTTACTACTTAACTGGGCAGGGTTGTTGAGTGTAGATCAAATGAAGTACAAGGACCCTAACCAGTCAATAGATACTCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGGTTGAGCGCAAGCATGCATCTGCTGATTTGGTTAATAAGTATTTCATTGGCAGTGTAATGAGTGAGGGAGGGAGTATTCCGGCTCCACAGGCATCTGCTGAAACCTGGGTTGACATGGTGAATGAATTTCAGAAGGGTGCTGTGTCAACCCGGCTTGGAATTCCAATGTTTTATGGTGTTGATGCTGTTCATGGCCACAATACTGTTCACAATGCAACTATTTTTCCTCACAATATTGGTCTTGGAGCTACCAGGGAGCCTGAACTAGTTAAGAGAATTGGAGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATTCAATATGCTTATGCACCCTGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATACTGAACTAGTTCAAGCTATGACCGAAATCATACCAGGATTGCAAGGGGACATCCCTCATAATTTACCAAAGGGTGTCCCTTTTATCGCTGGAAAAGAAAAGGTTTTAGGTTGTGCAAAGCACTATGTGGGTGACGGTGGAACAATCGATGGGATTAATGAGCACGACACTGTTATAGATAGAGATGGATTGATGAAAATTTACATGCCAGCCTACTTGACCTCAATCAGTAAAGGAGTGGCAACCATTATGGTCTCTTACTCCAGTTGGAATGGTGTAAAAATGCATGCTCACCATGATCTTATTACTGGCTTCCTCAAGAATACTCTCCATTTCAAGGGTATTGATAGGATCACATCTCCACATCGTGCAAACATCACTTATTCAATCGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGTTTCCAAAGCTTTACACAGAATTCATAGATGGTCTATCCATGTTGGTGAAAAATAACCGCATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAATTTTGTGGGTGAAGTTCATGATGGGTATTTTTGAGGACCCTTTTGCTGATTACAGTTTGGCCAAATATTTGGGAATCCAGGAGCACAGAAATTTGGCTAGAGAAGCTGTGAGGAAATCAATGGTCCTTCTGAAAAATGGTGAATCTGCTGATAAGCCTTTATTACCTCTTCCTAAAAAGGTACCAAAAATACTTGTGGCTGGAAGCCATGCAGATAATCTAGGATACCAGTGTGGTGGCTGGACTATAGGATGGCAAGGGGTCAGTGGGAACAATCTTCTCGAAGGGACTACAATTCTCAAGGCTGTGAAAAACACTGTTGATCCTGAAACCAAAGTTGTCTACAAGGAGAACCCTGATGCAGAATTTGTTAAATCCAATGGATTTTCCTATGCAATTGTTGTAGTAGGAGAGCATCCTTATGTTGAAACGCATGGTGACAACATGAACTTGGCAATCCCAGACCCTGGTCCTGAGATCATAAGAAACATCTGTGGAGTAACAAAATGTGTGGTTATCGTAATTTCTGGTCGTCCTTTAGTGATTGAACCATATGTCGGTATAATAGATGCACTAGTTGCTGCATGGCTTCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATATGGTGACTATGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAATCTGTTGATCAGCTTCCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGATTTGGTCTTTCTACCCAACCAACTAAGGCCTTGTTCTCTGAGTAG 1887 0.4261 MDLDGMAKISMLLVGLYLLLNWAGLLSVDQMKYKDPNQSIDTRVEDLVSRMTLEEKIGQMLQVERKHASADLVNKYFIGSVMSEGGSIPAPQASAETWVDMVNEFQKGAVSTRLGIPMFYGVDAVHGHNTVHNATIFPHNIGLGATREPELVKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYSEDTELVQAMTEIIPGLQGDIPHNLPKGVPFIAGKEKVLGCAKHYVGDGGTIDGINEHDTVIDRDGLMKIYMPAYLTSISKGVATIMVSYSSWNGVKMHAHHDLITGFLKNTLHFKGIDRITSPHRANITYSIEAGVSAGIDMFMFPKLYTEFIDGLSMLVKNNRIPMSRIDDAVRRILWVKFMMGIFEDPFADYSLAKYLGIQEHRNLAREAVRKSMVLLKNGESADKPLLPLPKKVPKILVAGSHADNLGYQCGGWTIGWQGVSGNNLLEGTTILKAVKNTVDPETKVVYKENPDAEFVKSNGFSYAIVVVGEHPYVETHGDNMNLAIPDPGPEIIRNICGVTKCVVIVISGRPLVIEPYVGIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTQPTKALFSE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01540 628 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 26 393 - -
Phac1g01540 628 Pfam Glycosyl hydrolase family 3 N terminal domain 52 370 IPR001764 GO:0004553|GO:0005975
Phac1g01540 628 FunFam Glycosyl hydrolase family protein 394 620 - -
Phac1g01540 628 Gene3D - 394 620 IPR036881 GO:0004553|GO:0005975
Phac1g01540 628 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 30 624 - -
Phac1g01540 628 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 409 618 IPR036881 GO:0004553|GO:0005975
Phac1g01540 628 Gene3D - 26 393 IPR036962 GO:0004553|GO:0005975
Phac1g01540 628 PRINTS Glycosyl hydrolase family 3 signature 137 156 IPR001764 GO:0004553|GO:0005975
Phac1g01540 628 PRINTS Glycosyl hydrolase family 3 signature 183 199 IPR001764 GO:0004553|GO:0005975
Phac1g01540 628 PRINTS Glycosyl hydrolase family 3 signature 229 245 IPR001764 GO:0004553|GO:0005975
Phac1g01540 628 PRINTS Glycosyl hydrolase family 3 signature 113 129 IPR001764 GO:0004553|GO:0005975
Phac1g01540 628 Pfam Glycosyl hydrolase family 3 C-terminal domain 409 618 IPR002772 GO:0004553|GO:0005975
Phac1g01540 628 SUPERFAMILY (Trans)glycosidases 31 408 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01540 Phac-Chr1 19317323 19320887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01540 31 623 Glycoside Hydrolase AT5G20950 69.218 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01540 K05349 - gmx:100816705 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01540 1 19317323 19320887 Phac1g01540 1 19317323 19320887 ECH