Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01535 ATGGAAGTAGCCCTTTCCCTTCAAGTACAAAAGCAGAATTTGCATATAACAGGCCGTAAAACTTTATGTGTTGGATCCCAGAAGGATTTGTGGCTTGTTGTGCGAGAAGGATCTCTAAATGATGTAGAGTTGGCCTTGGCATCATTGAAGAAGAGTGGGGGAAATATTAATCTGAGGAACACCTTTGGGTTGACTCCTCTTCATATTGCAAGTTGGAGAAACCATATTCCCATTGTAAGGAGGCTTCTTGCAGCTGGTGCAGATCCTGATGCCCGGGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTCTGCATTTTGGTCATCTTGCTGCAGCAAGCATCCTTCTTCAGCATGGTGCCTCTATTACATTGGAGGACTCTAAATCTCGAATACCTGTAGATCTCTTATCTGGCTCTGTATTTCAGGCTCTTGGAAATGAACAAAGTTCAGTGGCAACTGAGGTCTTTAGCTGGGGCAGTGGTGCAAATTATCAGCTTGGAACTGGAAATGCGCATATTCAGAAGTTACCATGCAAAGTTGATTCACTTGGTGGTTCATTCATAAAGCTCATTTCTGCAGGGAAGTTCCATAGTGTGGCGCTCACTGCTCGTGGAGAAGTGTATACTTGGGGATTTGGAAGGGGTGGCCGTCTAGGGCATCCTGATTTTGATATACACAGTGGTCAAGCTGCTGTCATCACTCCCCGCCAAGTGACTTCTGGTCTGGGTTCCCGCAGAGTGATGGCAATTGCTGCAGCTAAGCATCATACGGTTATTGCTACTCAGGGCGGGGAAGTGTTCACTTGGGGATCCAATAGAGAGGGACAGCTTGGGTACCCTTCTGTTGATACACAACCCACACCTCGTAGAGTATCTTCTTTGAGGTCAAAAATTGTTGCTGTTGCTGCAGCAAATAAACACACGGCTGTAGTTTCTGATTTAGGTGAAGTCTTTACTTGGGGTTGTAACAGGGAGGGTCAGCTTGGTTATGGCACCTCAAACTCAGCATCTAATTACACCCCACATGTGGTTGAATCCTTGAAGGGAAAGACTTTGGCCAGAGTTTCTGCTGCAAAATATCACACAATTGTATTAGGATCTGATGGAGAGGTATTTACCTGGGGTCATCGACTTGTTACTCCAAAACGTGTAGTAGTTAGTAGGAACTTGAAGAAAAGTGGAAGCACTCCTTTAAAATTTCACCGCAAAGAACGGCTTAATGTGGTTTCTATAGCTGCTGGAATGGTACACAGCATGGCCCTTACAGATGATGGCGCATTATTTTATTGGGTCTCCTCTGATCCTGATCTTAGATGCCAACAGTTATATGCTATGTGTGGAAGAAATATGGTTAACATATCAGCTGGAAAGTACTGGACTGCAGCTGTTACAGATACAGGTGATGTTTACATGTGGGATGGGAAGAAAGGTAAGGATAAGCCCCTTGTTGCAACTCGGTTGCATGGTGTAAAGAAGGCTACATCAGCTTCAGTTGGTGAAACACATTTACTAATTGTGGCTTCACTCTATCAACCTGTCTACCCTCCCAACACGATTGAGAATTCTCAGACCACGTTGAATAGCAGGGATGATATGGAAGAGTTAAATGAAGACATTTTATTTGAGGATATAGATTCCAGTAAAATGATATCTAGTGTACAAAATGACACTAGCAGGCAGAGATCTACCCCCAGCTTAAAAAGCCTCTGTGAAAAAGTAGCTGCAGAGTGTTTAGTGGAGCCACGGAATGCAGTACAACTGCTTGAGATTGCTGATTCTCTTGGAGCAGATGATTTGAAGAAATATTGCGAGGAGATTGTCATGCGCAACCTTGATTACATATTTACAGTTTCATCACATACCATAGCAAGTGCATCACCAGATGTTCTGGCTAACCTTGAGAGGTTGCTAGACCAGAGGTCATCTGAGCCATGGAGTCATCGTCGGCTTCCTACTCCAACTGCTACTTTCCCTGCCATCATTAACAGTGAAGAGGATGATAGTGAGATAGAGTTTCAAAGGACTCGTGACAAGCCCTTGAAAATGGAAAAAGTCCAAACAGTAGATTCCTTTCTACAGCCCCAGGATGATTCAGATAAAGAAATCTCGAAAGTAGTCCGAGCTATAAGGAAGAAGTTGCAGCAGATTGAGATGCTCGAAGATAAGCTGTCTAATGGACATCTTCTTGATGACCAGCAGATTGCAAAGCTTCAATCTAAGTCAGCACTTGAAAGCTCACTTGCAGAGCTAGGTGTTCCTGTTGAGACGTCACAAAATAAAGAATCATCTTTTATGTTACCAGAAGGAAAGGGCAGTAAGAAGGGTAAACTATCAAAGAAACAAAGGAGAAAGAGTGGCAAATCAAACATAGGGCAGACAGAAATAGAATCTGTTTACGCTAAAAGTGAAGCCATTCCCAACTCGGAGGACCTGTTGGACATTGACATCATGGGGGTTTCTGATTCAAAGGTGGAAGAGGATGCTGTATGTGAAGAAATCACAGTAGACCAAGGTGCAAAAGATTTAGCTTTTGTAGTGCAAAAGAATGATGCTTTAGAGTTGCTGAAAGCCAAGGGTCCTTCACCAAAAGCTTCAAAGAAGAAGAGCAAGAAGGGTGGTCTTTCTATGTTTCTGAGTGGTGCTCTTGATGAAGCCCCTAAAGAGGTAGCTCCTCCTCCTCCACCAGCACCAAAAAATGAGGGTCCTGCATGGGGTGGGGCCAAGTTCATGAAGGGTTCTGCTTCTCTTCGTGAAATCCAGGATGAACAAGGCAAAATAAAGATAAACAAGCCAGCTGGGAGCAAAGATAAGGTGGAAGATCTTTCTGATTTTGGCAGTGGGGTTAAAATAAAGTTGAGTTCATTTCTTCTTTCCAGCCCAATACCTGTTACCACAACTCGTAGTTCCCAGGTATCTGATGGAGAAATAAGTACCCCTCCTTGGGCTGCTTCAGGAACCCCTCCCCATCCTTCTCGGCCATCCTTAAGGGACATCCAAATGCAACAGGGAAAGAAACAACAAAGCCTTTCACACAGTCCAAAGACTAGAACAGCCGGGTTTTCCATTGCTACCGGTCAAGGCGGCTCGCCGTCGGAAACAAATGGAGTTAGTCGCTGGTTCAAGCCTGAGGTGGAAACACCATCCTCAATTCGTTCTATTCAAATTGAGGAAAAGGCTATTAAAGATCTCAAGCGCTTCTACAGCAGTGTCAAGATTGTCAGGAAGCAATCTTGA 3237 0.443 MEVALSLQVQKQNLHITGRKTLCVGSQKDLWLVVREGSLNDVELALASLKKSGGNINLRNTFGLTPLHIASWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAAASILLQHGASITLEDSKSRIPVDLLSGSVFQALGNEQSSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVIATQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSLRSKIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTLARVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKKSGSTPLKFHRKERLNVVSIAAGMVHSMALTDDGALFYWVSSDPDLRCQQLYAMCGRNMVNISAGKYWTAAVTDTGDVYMWDGKKGKDKPLVATRLHGVKKATSASVGETHLLIVASLYQPVYPPNTIENSQTTLNSRDDMEELNEDILFEDIDSSKMISSVQNDTSRQRSTPSLKSLCEKVAAECLVEPRNAVQLLEIADSLGADDLKKYCEEIVMRNLDYIFTVSSHTIASASPDVLANLERLLDQRSSEPWSHRRLPTPTATFPAIINSEEDDSEIEFQRTRDKPLKMEKVQTVDSFLQPQDDSDKEISKVVRAIRKKLQQIEMLEDKLSNGHLLDDQQIAKLQSKSALESSLAELGVPVETSQNKESSFMLPEGKGSKKGKLSKKQRRKSGKSNIGQTEIESVYAKSEAIPNSEDLLDIDIMGVSDSKVEEDAVCEEITVDQGAKDLAFVVQKNDALELLKAKGPSPKASKKKSKKGGLSMFLSGALDEAPKEVAPPPPPAPKNEGPAWGGAKFMKGSASLREIQDEQGKIKINKPAGSKDKVEDLSDFGSGVKIKLSSFLLSSPIPVTTTRSSQVSDGEISTPPWAASGTPPHPSRPSLRDIQMQQGKKQQSLSHSPKTRTAGFSIATGQGGSPSETNGVSRWFKPEVETPSSIRSIQIEEKAIKDLKRFYSSVKIVRKQS* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01535 1078 MobiDBLite consensus disorder prediction 755 792 - -
Phac1g01535 1078 SUPERFAMILY RCC1/BLIP-II 407 507 IPR009091 -
Phac1g01535 1078 SMART ANK_2a 62 91 IPR002110 GO:0005515
Phac1g01535 1078 SMART ANK_2a 96 125 IPR002110 GO:0005515
Phac1g01535 1078 Gene3D - 386 510 IPR009091 -
Phac1g01535 1078 Gene3D - 142 385 IPR009091 -
Phac1g01535 1078 ProSiteProfiles Ankyrin repeat region circular profile. 62 93 - -
Phac1g01535 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 264 IPR000408 -
Phac1g01535 1078 ProSiteProfiles Ankyrin repeat profile. 96 128 IPR002110 GO:0005515
Phac1g01535 1078 ProSiteProfiles Ankyrin repeat profile. 62 94 IPR002110 GO:0005515
Phac1g01535 1078 MobiDBLite consensus disorder prediction 962 980 - -
Phac1g01535 1078 Gene3D - 7 141 IPR036770 -
Phac1g01535 1078 Pfam Ankyrin repeats (3 copies) 37 127 IPR002110 GO:0005515
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 155 171 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 189 202 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 302 318 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 208 224 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 318 332 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 415 433 IPR000408 -
Phac1g01535 1078 PRINTS Chromosome condensation regulator RCC1 signature 265 281 IPR000408 -
Phac1g01535 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 154 205 IPR000408 -
Phac1g01535 1078 SUPERFAMILY RCC1/BLIP-II 119 431 IPR009091 -
Phac1g01535 1078 MobiDBLite consensus disorder prediction 858 914 - -
Phac1g01535 1078 MobiDBLite consensus disorder prediction 962 1041 - -
Phac1g01535 1078 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 192 202 IPR000408 -
Phac1g01535 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 206 260 IPR000408 -
Phac1g01535 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 155 202 IPR000408 -
Phac1g01535 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 265 312 IPR000408 -
Phac1g01535 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 316 366 IPR000408 -
Phac1g01535 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 316 369 IPR000408 -
Phac1g01535 1078 MobiDBLite consensus disorder prediction 996 1037 - -
Phac1g01535 1078 PANTHER BTK-BINDING PROTEIN-RELATED 25 1069 - -
Phac1g01535 1078 SUPERFAMILY Ankyrin repeat 35 136 IPR036770 -
Phac1g01535 1078 Coils Coil 703 723 - -
Phac1g01535 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 265 315 IPR000408 -
Phac1g01535 1078 ProSiteProfiles Ankyrin repeat region circular profile. 96 127 - -
Phac1g01535 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 370 425 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01535 Phac-Chr1 19168984 19178943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01535 35 136 Acyl Lipid Metabolism Gene Families AT5G53470 34.314 1.01e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01535 K24810 - gmx:100800604 1867.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01535 1 19168984 19178943 Phac1g01535 1 19168984 19178943 ECH