Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01482 ATGCTAGCATGTCCTAGCAGCTCCCTCCATGGCCTCGCCACGCTGCAACGCCATTCCCAATCACCTCACTTTCTCCTCTCCAATTCGTTCTTATTCCCTCCCTCTCCTCGACTGGCCACTTCTCGCAAATGCAACTTCCGCTCGCTTCTTTCTGGCAGGATTAGCCGCCGCTCCGCGGTCAGAGCATCCGCTAACTCACCGGAGGTGTCGGAGTCTGTCGTCGGCGACGGTGGCGCACTGCAACCGTATTCCGTGAAGATTCCCGTCGGTGATAGACATATATTGGTTGAGACTGGTCATATAGGAAGACAGGCAAGTGGCTCTGTTACAGTTACAGATGGAGAGACTATTGTGTACACTACTGTTTGCTTGGATGATGTTCCTAGTGAACCATCTGACTTTTTCCCCCTTTCTGTTAATTATCAAGAGCGATTTTCAGCAGCTGGTCGTACTAGTGGAGGGTTTTTTAAGCGAGAAGGAAAGACAAGAGACCATGAGGTTCTTATTTGTAGATTAATTGATAGGCCTCTACGTCCTACCATGCCAAAGGGATTCTATCATGATACTCAAATATTATCTTGGGTTTTGAGCTATGATGGACTGCACTCCCCTGATTCTTTGGCTGTCACTGCAGCTGGTATAGCAGTTGCACTTTCAGAAGTACCAATGTCAAAAGCAGTTGCTGGGGTTCGTGTTGGTCTTGTTGGTGACAAGTATATAGTAAATCCTACAACTAAGGAGATGGAACACTCTGAATTGGACCTCTTGCTGGCTGGCACAGATGATGCAATACTGATGATAGAGGGCTATAGCAATTTTATTCCAGAAGAAAAGTTACTCAGGGCTGTCGAAGTTGGTCAGGATGCAGTAAGAGCAATCTGTAATGAGGTAGACGCTTTGGTTAAGAAGTGTGGGAAGCCAAAGATGTTGGATGCCATCAAGTTACCTCCTCCTGAACTTTATGAACATGTTGAAGTATACTTCTTACTATCCTTTATCATTTTCTGCTAA 1011 0.4609 MLACPSSSLHGLATLQRHSQSPHFLLSNSFLFPPSPRLATSRKCNFRSLLSGRISRRSAVRASANSPEVSESVVGDGGALQPYSVKIPVGDRHILVETGHIGRQASGSVTVTDGETIVYTTVCLDDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGKTRDHEVLICRLIDRPLRPTMPKGFYHDTQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPMSKAVAGVRVGLVGDKYIVNPTTKEMEHSELDLLLAGTDDAILMIEGYSNFIPEEKLLRAVEVGQDAVRAICNEVDALVKKCGKPKMLDAIKLPPPELYEHVEVYFLLSFIIFC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01482 336 Gene3D - 71 307 IPR027408 -
Phac1g01482 336 Pfam 3' exoribonuclease family, domain 1 92 222 IPR001247 -
Phac1g01482 336 SUPERFAMILY Ribosomal protein S5 domain 2-like 84 222 IPR020568 -
Phac1g01482 336 Pfam 3' exoribonuclease family, domain 2 226 288 IPR015847 -
Phac1g01482 336 CDD RNase_PH_PNPase_1 83 309 - -
Phac1g01482 336 SUPERFAMILY Ribonuclease PH domain 2-like 224 309 IPR036345 -
Phac1g01482 336 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 60 325 IPR012162 GO:0003723|GO:0004654|GO:0006402
Phac1g01482 336 FunFam Polyribonucleotide nucleotidyltransferase 81 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01482 Phac-Chr1 18194275 18212616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01482 K00962 - pvu:PHAVU_001G105200g 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01482 1 18194275 18212616 Phac1g01482 1 18194275 18212616 ECH