Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01438 ATGGAAGCAGAGGTAAATGAGAAGCTTTTGCATGAGCGAAAGAAGAATTGTTTGGAAGAGGAAGAGTCAGTGGGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCTGCCATATTCACAAGGTTTTCAACTTTTGGGATTGTGGTGATTAGTCAATCCTTCATTGGCCATATTGGCTCAACTGAACTAGCTGCATATGCCCTTGTTATGACTGTCCTAGTCAGGTTTTCAAATGGGGTATTGATTGGCATGGCAAGTGCTTTGGAAACTCTTTGTGGTCAAGCCTATGGGGCCAGAAAGTATGACATGCTTGGAGTCTATCTTCAAAGATCATGGATAGTGTTGTTCACAGCCTCTATACTCCTTCTTCCCATTTACATCTTCACCACCCCTTTGTTAGAGGCTCTAGGCCAAGACAAAACCATTGCTCGAGTTGCTGGAACCATTTCTCTCTGGTCAATTGGTATCATGTTTTCTGTCTCAGTGTCATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGAACAAGATCATTGTCTACCTTGCAGCAGCTTCAATTTCACTCCATGTTTTCCTGTCATGGCTTTTAACTGTGCACCTCAAGTTTGGGCTCAACGGTGCACTCACGTCAACGCTTTTGGCATATTGGATTCCAAACTTGGGCCAGCTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTCTGGTCTGTTATCAAGCTTTCCCTCTCTTCTGGTGCTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTTCTTACAGGCAACATGGAAAATGCAGAAGTGTCCATTGATGCTCTGGCCATATGCCTCAACATCAATGGATGGGAAATGATGATAGCTCTTGGTTTCTTTGCTGCTGCAGGTGTCCGGGTTGCAAATGAGCTTGGAAGAGGGAGTTCAAAGGCTGCAAAATTTTCCATTCTGATAACAGTTCTGACATCATTTGTGATTGGATTGGTGCTATTTTTGGTGTTTCTGTTTCTGAGGGAAAGACTTGCTTATATTTTCACTACAGACCCTGAGGTGGCTAAAGCAGTTGCTGATTTATCACCATTGCTCTCATTTTCCATCTTGTTGAACAGTGTCCAACCTGTGCTCTCTGGAGTTTCTGTGGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATTGCCTGTTATTATCTCATTGGTATTCCTGTTGGACTGCTGCTTAATAATCTTCTCCATTTGGATGTCAAGGGTATTTGGATTGGAATGATGTTTGGAACATTTGTTCAGACCATTATGCTTATTACAATCACATTGAAAACGGATTGGGACAAGCAGGTAGAGCTTGCTCGAAATCGTGTTAACAAATGGACATTGGTGGAGAACGAAGAATCAAACACTAGACCAAGCATATCTAGCTAA 1470 0.4293 MEAEVNEKLLHERKKNCLEEEESVGKRVWEESKKMWVVAGPAIFTRFSTFGIVVISQSFIGHIGSTELAAYALVMTVLVRFSNGVLIGMASALETLCGQAYGARKYDMLGVYLQRSWIVLFTASILLLPIYIFTTPLLEALGQDKTIARVAGTISLWSIGIMFSVSVSFTCQMFLQSQSKNKIIVYLAAASISLHVFLSWLLTVHLKFGLNGALTSTLLAYWIPNLGQLVFIMTKCPDTWKGFSFLAFKDLWSVIKLSLSSGAMLCLEIWYNTVLILLTGNMENAEVSIDALAICLNINGWEMMIALGFFAAAGVRVANELGRGSSKAAKFSILITVLTSFVIGLVLFLVFLFLRERLAYIFTTDPEVAKAVADLSPLLSFSILLNSVQPVLSGVSVGAGWQSIVAYVNIACYYLIGIPVGLLLNNLLHLDVKGIWIGMMFGTFVQTIMLITITLKTDWDKQVELARNRVNKWTLVENEESNTRPSISS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01438 489 CDD MATE_eukaryotic 31 464 IPR045069 GO:0042910|GO:1990961
Phac1g01438 489 NCBIfam MATE family efflux transporter 41 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phac1g01438 489 Coils Coil 1 21 - -
Phac1g01438 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 459 - -
Phac1g01438 489 Pfam MatE 263 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phac1g01438 489 Pfam MatE 41 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01438 Phac-Chr1 17145541 17150224 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01438 K03327 - gmx:100775619 798.89