Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01370 ATGGTTGTGGACCTGATGGAACTCTATCTACAAAGGCTAAAGCAAAGAAGGCCTGCATATCTGAAGACTCCTGCCTTGGCCGAATTTGAAGCTCAGTTCCCTTATGAACCCACACCAGATCAGAAACAGGCATTTATTGATGTTGAGAGGGATTTGACGGAGCAAGAAACACCAATGGACAGATTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAGGTTGCAATACGTGCTATCTTCTGTGTTGTCTCAGCTAAAAAACAAGCGATGGTTCTGGCACCAACAATAGTTCTAGCAAAACAACATTTTGATGTTATTTCAGAGCGATTTTCTGTATACCCTGATATCAAGGTTGGGCTATTAAGCAGGTTCCAGACCAAAGCTGAGAAAGAAGAGAATTTGGACATGATTAAGAATGGTAGCCTGGATATTATAGTTGGGACTCATTCACTCCTAGGAGATCGTGTTACATATAACAATCTTGGTCTGCTTGTGGTTGATGAGGAGCAGAGGTTTGGTGTCAAACAGAAGGAGAAGATTGCTTCTTTTAAAACTTCTGTGGATGTACTTACTTTATCCGCAACCCCTATACCACGAACTCTTTATTTAGCATTAACAGGGTTTCGTGATGCCAGTTTAATATCAACACCACCTCCAGAAAGAGTTCCTATAAAGACTCACCTTTCTTCATTCAGTGAGGACAAAGTAACGTCAGCCATCAAGTATGAGCTTGATCGTGGTGGTCAACTTTTTTATGTTCTGCCACGTATTAAAGGACTGGATGAAGTAATGGCATTTCTTGTAGAGTCATTTCCCAATGTGGAAATAGCCATTGCCCATGGGAAGCTGTTCTCAAAGCAATTAGAGGATACAATGGAGAAGTTTGCCCTCGGAGAAATAAAAATCCTTATCTGCACAAATATAGTAGAAAGTGGGCTTGATATTCAAAATGCAAATACCATTATCATTCAGGATGTTCAGCAATTTGGCCTTGCACAGTTATACCAGTTGCGTGGAAGGGTTGGGCGAGCAGATAAGGAAGCACATGCATACTTATTTTATCCTGACAAAGGCCTGCTTTCTGATCAAGCATTGGAGAGGCTTGCTGCTATTGAAGAATGTCGTGAACTTGGTCAAGGCTTCCAACTAGCTGAGAAAGACATGGGTATAAGAGGTTTTGGTGCAATTTTTGGTGAACAACAATCAGGAGATGTTGGAAATGTTGGTGTTGATCTGTTTTTTGAGATGCTCTTCGAGAGCTTGTCCAAGGTTGAAGATCACTGTGTTGTTTCAGTTCCTTATCACACGGTACAGGTTGACATGAACATAAATCCTCATCTCCCTTCTGACTACATTAATTATCTGGAGAACCCTATGAAAATTTTAAGTGATGCTGAGAGAGTTGCCGAGAAAGACATCTGGAGTCTGATGCAATTTACAGAGAATTTGCGCCGCCAATATGGCAAAGAGCCTCGCTCCATGGAGATTTTACTAAAGAAGCTTTACATGAGGAGAATGGCGGCTGATTTAGGGATAAGCAGAATCTACTCTTTAGGGAAGATTATCTTCATGAAAACAAACATGAGTAAAAAGGTATTCAAGCTGATGACAGAGTCCATGGCATCAGATTTACATAGAAAGTCATTGGTTCTTGAGGGGGACCAAATTAAGGCTGAACTTCTTTTAGAGCTACCAAAAGAACAACTTCTTAATTGGATCTTTCAATGCCTGGCTGAACTTCATGCTTCACTACCCTCCTTCATTAAGTACTAG 1773 0.4078 MVVDLMELYLQRLKQRRPAYLKTPALAEFEAQFPYEPTPDQKQAFIDVERDLTEQETPMDRLICGDVGFGKTEVAIRAIFCVVSAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIKVGLLSRFQTKAEKEENLDMIKNGSLDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSSFSEDKVTSAIKYELDRGGQLFYVLPRIKGLDEVMAFLVESFPNVEIAIAHGKLFSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKGLLSDQALERLAAIEECRELGQGFQLAEKDMGIRGFGAIFGEQQSGDVGNVGVDLFFEMLFESLSKVEDHCVVSVPYHTVQVDMNINPHLPSDYINYLENPMKILSDAERVAEKDIWSLMQFTENLRRQYGKEPRSMEILLKKLYMRRMAADLGISRIYSLGKIIFMKTNMSKKVFKLMTESMASDLHRKSLVLEGDQIKAELLLELPKEQLLNWIFQCLAELHASLPSFIKY* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01370 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 358 IPR027417 -
Phac1g01370 590 SMART helicmild6 261 345 IPR001650 -
Phac1g01370 590 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 449 551 - -
Phac1g01370 590 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 52 214 IPR014001 -
Phac1g01370 590 SMART ultradead3 33 225 IPR014001 -
Phac1g01370 590 Gene3D - 217 423 IPR027417 -
Phac1g01370 590 CDD DEXHc_TRCF 23 216 - -
Phac1g01370 590 Gene3D - 2 216 IPR027417 -
Phac1g01370 590 Gene3D - 436 583 IPR037235 -
Phac1g01370 590 Pfam DEAD/DEAH box helicase 59 197 IPR011545 GO:0003676|GO:0005524
Phac1g01370 590 SUPERFAMILY TRCF domain-like 434 580 IPR037235 -
Phac1g01370 590 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 223 389 IPR001650 -
Phac1g01370 590 Pfam Helicase conserved C-terminal domain 241 344 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01370 Phac-Chr1 15572505 15600129 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01370 - - gmx:100805206 1093.95