Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01335 ATGGTAGAACAACCCCTTATGGGAGATGCTTTCAATTTCTTTAACCCTTTTAGGTATGAAACAGTTTTAGCTCGGCCAAATTTTGGTTTATCTGCCACGCCCTCTTCTACTTCATCTTCAACCAGAAGTCGTGGGGAGTCAACTGTTGGCCCTGCACATGAGGTCTTGAGTGATGATGATGATGGGGAAGGGGATGAAGACGATGATTACGATAATGGTCATGTTACGAATAAAGATAAGAATGGTACCAATTGTAGTAAGTTACATTTAAGAGATGATGATCTTGCCCAAGATGTTAAAACCATTTTGGATATAATGCATGAGATGGGTTCTGGAGCATCTGACATTAAGCAGAAGCTTGAGCATTGCAGTGTGGCGCTATCACAAGATCTGGTTGTGGAGGTCATTTCAAAAACTCGCAATGATTGGGAAGCGACTTTCACATTTTTCTTATGGGCTGGCAAGCAGCCCGGGTATGCTCATTCGGTTCGGGAGTATCATTCTATGATCTCCATTCTTGGCAAAATGAGGAAGTTTGATACTGCTTGGACCTTAATTGAGGAAACGAGAGGAGGTCGAACTGGTACATCTATTGTCACTCCACAGACACTTTTGATCATGATCAGGAGATACTGTGCTATACATGACGTTGCAAGGGCTATCAATACTTTCTATGCTTATAAACGGTTTAACTTTCAAATTGGGCTAGAGGAATTTCAAAGTCTTCTTTCTGCCCTTTGTCGGTATAAGAATGTGCAGGATGCTGAGAACTTACTCTTCTGCAACAAAAATGTATTCCCATTCGACATTAAAAGCTTTAACATAGTTCTGAATGGATGGTGTAATTTGATTGTTAGCACTAGTCAGGCAGAAAGAATATGGAAGGAGATGAGCAAGAGAGGAATCAAACACGATGTTGTCTCTTATGGAAGTATCATATCTTGCTATTCAAAATCTTCAACACTTTACAAGGTGCTTAGGATGTTTGACGAAATGAAGAAAAGGAAGATCACTCCCGATAGGAAGGTTTATAATGCGGTAATTTATGCTCTAGCAAAGGGTAGGCTTGTGAAAGAAGCTGTCAATCTCATTGAAAAAATGGAGGACAACAACATTATTCCGAATGTTGTTACATACAACTCCTTGATCAAACCTCTTTGTAAAGCTCGCAAAGTTGATGAAGCTAAACAACTTTTTGATGAGATGTTGAAGCGGCGTCTATCCCCAACAATTCAAACTTTCCATGCTTTCTTCCGTATGTTAAAGACCAAGAAACAAGTATTTGAGCTCTTGGACAAAATGAGAGGGCTGGGATGCTACCCAACCAATGAGACTTATATAATGTTGATAAGAAAGTTTTGCCGCTGGTGCCAGCTTGATGATGTATTTAAGATATGGGATGCAATGAGGGAAGATGGACTTAGCCATGATCGTAGTTCATATATAGTACTGATTCATGGGCTCTTTCTAAATGGAAAACTAGAAGAAGCATACAGATATTATGCAGAGATGCAAGAGAAAGGCTTCCTTCCTGAACCAAAGACGGAAGAAATGCTTCAGGCATGGGTTTCTGGGAAACAGGCAAAGGAGGACCAGGTGACAGGATTAGAACCTAATCAACTTGAAAATGGTAGTCTTAATAATATAGTGAAGGACATACCCAGTAAATTTGATAGGGAAAAATGTTTTCTTCGCCAACCTGAGATCAGAAGGGTAACAAGAGAACGAGGTTTTTCTTTATGGGATTAA 1749 0.3991 MVEQPLMGDAFNFFNPFRYETVLARPNFGLSATPSSTSSSTRSRGESTVGPAHEVLSDDDDGEGDEDDDYDNGHVTNKDKNGTNCSKLHLRDDDLAQDVKTILDIMHEMGSGASDIKQKLEHCSVALSQDLVVEVISKTRNDWEATFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWTLIEETRGGRTGTSIVTPQTLLIMIRRYCAIHDVARAINTFYAYKRFNFQIGLEEFQSLLSALCRYKNVQDAENLLFCNKNVFPFDIKSFNIVLNGWCNLIVSTSQAERIWKEMSKRGIKHDVVSYGSIISCYSKSSTLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIEKMEDNNIIPNVVTYNSLIKPLCKARKVDEAKQLFDEMLKRRLSPTIQTFHAFFRMLKTKKQVFELLDKMRGLGCYPTNETYIMLIRKFCRWCQLDDVFKIWDAMREDGLSHDRSSYIVLIHGLFLNGKLEEAYRYYAEMQEKGFLPEPKTEEMLQAWVSGKQAKEDQVTGLEPNQLENGSLNNIVKDIPSKFDREKCFLRQPEIRRVTRERGFSLWD* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Phac1g01335 582 Pfam PPR repeat family 374 421 IPR002885 -
Phac1g01335 582 Gene3D Tetratricopeptide repeat domain 285 424 IPR011990 GO:0005515
Phac1g01335 582 Pfam PPR repeat 445 474 IPR002885 -
Phac1g01335 582 Pfam PPR repeat 480 509 IPR002885 -
Phac1g01335 582 Gene3D Tetratricopeptide repeat domain 425 534 IPR011990 GO:0005515
Phac1g01335 582 MobiDBLite consensus disorder prediction 31 83 - -
Phac1g01335 582 Pfam Pentatricopeptide repeat domain 292 350 IPR002885 -
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 269 304 IPR002885 -
Phac1g01335 582 NCBIfam pentatricopeptide repeat 343 376 IPR002885 -
Phac1g01335 582 NCBIfam pentatricopeptide repeat 377 410 IPR002885 -
Phac1g01335 582 NCBIfam pentatricopeptide repeat 480 511 IPR002885 -
Phac1g01335 582 NCBIfam pentatricopeptide repeat 307 340 IPR002885 -
Phac1g01335 582 NCBIfam pentatricopeptide repeat 445 477 IPR002885 -
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 477 511 IPR002885 -
Phac1g01335 582 Gene3D Tetratricopeptide repeat domain 114 284 IPR011990 GO:0005515
Phac1g01335 582 MobiDBLite consensus disorder prediction 31 47 - -
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 442 476 IPR002885 -
Phac1g01335 582 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 340 374 IPR002885 -
Phac1g01335 582 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 91 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01335 Phac-Chr1 14900345 14902093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01335 270 548 Glycosyltransferase AT1G05670 22.680 1.09e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01335 - - gmx:100785546 936.791