Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01332 ATGTCGTCTACGGACGTTGTCTCGCTATTGGAGAACTCGAAGGAGCTCGATCGGGTAAGGAAAGAACAGGAGGAGATTCTCTCAGAAATCAACAAGCTCCACAAGAAGCTTCAAACGACTCCTGAAATGGTTGAGAAGCCCGGGGATACCTCATTGGCAAGGCTTAAAGTGTTGTACACTCAAGCAAAAGATCTTTCAGAAAGTGAAGCAAGTATTTCCAACTTAATGTTAAGCCAAATTGATGGAATACTGCCTACAGGTCCACAGGGGCAAACACGAAGAAGAATAGGAAAAGAAGGTAATGAGCAGAAAAGGAAACGAGTGAAGACTGAGTCAGATATTTCAAGGCTAACTCCTAGTATGCGAAATCATCTTGAAGCTTGTGCCAGTCTTAAAGGAGAACAGGTAGCAGCAAGGGTCACCCCACGAAATGCTGATAAGGATGAATGGTTTGTTGTAAAAGTGATTCATTTTGACAAGGAATCAAAGGAATTTGAAGTACTAGATGAGGAACCAGGAGATGACGAAGAAAGCAATGGCCAAAGACAATACAAGCTTCCCATGGGAAATATCATTGCTTTTCCCAAGAGTAATGATCCTTCAAGTGCTCCAGATTTTCCTCCTGGAAAACATGTTTTGGCGGTCTATCCAGGAACTACAGCACTCTATAAAGCAACAGTTGTTCAAGGCCCTCGCAGAAGGAAGACTGAGGACTATGTGTTGGAATTTGATGATGACGAAGAAGATGGATCTTTACCTCAAAGGACAGTGCCCTTCCATAAGGTGGTTCTTCTTCCAGAAGGACATCGCCAATGA 816 0.4326 MSSTDVVSLLENSKELDRVRKEQEEILSEINKLHKKLQTTPEMVEKPGDTSLARLKVLYTQAKDLSESEASISNLMLSQIDGILPTGPQGQTRRRIGKEGNEQKRKRVKTESDISRLTPSMRNHLEACASLKGEQVAARVTPRNADKDEWFVVKVIHFDKESKEFEVLDEEPGDDEESNGQRQYKLPMGNIIAFPKSNDPSSAPDFPPGKHVLAVYPGTTALYKATVVQGPRRRKTEDYVLEFDDDEEDGSLPQRTVPFHKVVLLPEGHRQ* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01332 271 FunFam SAGA-associated factor 29 isoform X6 198 271 - -
Phac1g01332 271 PANTHER UNCHARACTERIZED 16 271 IPR037802 GO:0000124
Phac1g01332 271 MobiDBLite consensus disorder prediction 83 113 - -
Phac1g01332 271 Pfam SGF29 tudor-like domain 132 265 IPR010750 -
Phac1g01332 271 CDD Tudor_SGF29_rpt1 132 198 IPR047288 -
Phac1g01332 271 CDD Tudor_SGF29_rpt2 206 265 IPR047287 -
Phac1g01332 271 Gene3D - 198 271 - -
Phac1g01332 271 MobiDBLite consensus disorder prediction 95 113 - -
Phac1g01332 271 Gene3D - 134 197 - -
Phac1g01332 271 FunFam SAGA-associated factor 29 isoform X6 134 197 - -
Phac1g01332 271 Coils Coil 16 36 - -
Phac1g01332 271 ProSiteProfiles SGF29 C-terminal domain profile. 126 271 IPR010750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01332 Phac-Chr1 14795734 14802658 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01332 K11364 - gmx:100807100 502.671