Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01223 ATGGGTAGCACATTTAATCCACAAATTTTAGTGGAAAAACTAGCCAAGCTGAATGGTTCCCAAACAAGCATAGAGACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGGCAATTTCATGGTTCTCCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAAGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTCCGAGATGTGATTCAAAATGGAGATGATTTTGCTAGGAATGCGGCACTTCGACTGATTGTTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTTAAGGAAGAGTTTGTTGGTAGGAATGTGGAAAACACTACTCGAGATGTGAAGCCTACAAACATGAAACTGAGGCCATCTTCAGGGAATGCATTGGAGAAAATAGTTTCAGCTTTTCATGTTGTTTATGGAGGGCAAAAAGATGAAGACGCCATATTGAGCAAATGCAGTAATGCCATTAACTGTCTTGACAAAGCAGATAAAGAAATAGTGTCAGGGCAATTTGGTGGATCCGCACTGGTGGATGAGCTCCAGGGGCATAATGCTGTACTGAAGGACTGCATTGAGCAGTTAACAGCCATAGAGTCATCTAGAACTAGTCTCGTGTCTCACTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCAAATGTACGGTCAGATCGGGCGTCCAACAACTGCCAACAGTTACTTAATGGCAACAACATTCAGCCAATAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGTCATCTGCAAGTTTTAGTATTTCTCGTGAAAGGGAGCAATCTGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAGAAATCTGGACAGGTTGAGGAAGATCCACGCAAATCTGCAGCTGCTGCAGTAGCAGCAAAACTTACTGCTTCAACATCCTCCGCGCAGATGCTATCATATGTGCTGTCCTCCCTAGCATCAGAAGGTGTCATAGGCAATCAGTCTTCAGCTGATTATCACTCTGAGAAGAGAACCAAGCTCGAGAATGACCAACCATCTTTTATGCCATCTCAGAATCCTCAACAACCACTTCCTCCCTTCTCTCTACCTGAGTCTATTCAACACAATGCTCCTACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCGTCACCTCCCCCATTGCCACCACCACCACCTCCAATATCACAATACCCTGTGCCGCAGTTCATGCAGACTGCTGGATCCATTAGTAGTATGGCATACAGCTATGGCATGACACAACAGCCGTCAATAGCAGCCTATCCCAGTGTTGGTGCTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1542 0.4423 MGSTFNPQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIVIWEERKVFGSRGQILKEEFVGRNVENTTRDVKPTNMKLRPSSGNALEKIVSAFHVVYGGQKDEDAILSKCSNAINCLDKADKEIVSGQFGGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAANVRSDRASNNCQQLLNGNNIQPIAEQSSKEIQTSMSSASFSISREREQSAPLMYTPQVSFSQKSGQVEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSSADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPESIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPISQYPVPQFMQTAGSISSMAYSYGMTQQPSIAAYPSVGASTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01223 513 MobiDBLite consensus disorder prediction 284 304 - -
Phac1g01223 513 MobiDBLite consensus disorder prediction 367 447 - -
Phac1g01223 513 MobiDBLite consensus disorder prediction 416 443 - -
Phac1g01223 513 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Phac1g01223 513 Pfam CID domain 9 120 IPR006569 -
Phac1g01223 513 SMART 558neu5 9 130 IPR006569 -
Phac1g01223 513 Gene3D - 2 129 IPR008942 -
Phac1g01223 513 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 494 - -
Phac1g01223 513 CDD CID_RPRD_like 7 128 - -
Phac1g01223 513 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Phac1g01223 513 MobiDBLite consensus disorder prediction 400 415 - -
Phac1g01223 513 MobiDBLite consensus disorder prediction 473 513 - -
Phac1g01223 513 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01223 Phac-Chr1 12716520 12731178 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01223 K15559 - gmx:100806108 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01223 1 12716520 12731178 Phac1g01223 1 12716520 12731178 ECH