Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01175 ATGCCAATGGCGGATCCAATCTCGAAGACTCTGATCGCGTTTGCGCTTTTAGCTTCTTTGTTGCTGTGTTCACACGCTTCCTCTGACGTTCCCTTCATCGTCTCTCACAAGAAGGCCTCCCTCAACAGACTCAAGTCTGGTGCGGAAAGGGTCTCTGTTACCATCGACATCTACAACCAAGGAACCTCGACCGCATATGATGTAAGTTTAAGCGACGATAGCTGGCCAAGTGATGCTTTTGAAGTTATTACCGGCAGCACTTCAAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGTTGGAGGCAAAATCAAAGGGATTATTTGCTGGTGAACCAGCTGTGATAAAGTTCCGTGTTCCCACAAAGGCTGCTTTGCAGGAGGCATATTCAACTCCCATATTGCCTTTGGATGTTCTTGCTGATAGACCTCCGGAGAAGAAGTTTGAATGGGTATGCTTCCTGTATGCTTGA 489 0.4724 MPMADPISKTLIAFALLASLLLCSHASSDVPFIVSHKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLSDDSWPSDAFEVITGSTSKSWERLDAGGILSHTFELEAKSKGLFAGEPAVIKFRVPTKAALQEAYSTPILPLDVLADRPPEKKFEWVCFLYA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01175 162 Pfam Translocon-associated protein beta (TRAPB) 17 159 - -
Phac1g01175 162 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 11 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01175 Phac-Chr1 11849262 11851114 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01175 K13250 - gmx:100500066 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01175 1 11849262 11851114 Phac1g01175 1 11849262 11851114 ECH