Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01160 ATGACCAGTTGGAAAAACCTTCTTCTACGAATCGGTGACAAGAGTCCCGAATACGGAGTCTCCTCTGACTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAACTTGACCACTCCCAAACCGATGTTTTGGAGTTCATTCTTATGTGTGCTGAGCATTTGTCCCACAAGATTCCTCTATATGGAACCCTGATCGGCTTAATTAACTTGGAAAATGAGGACTTTGGGAAACAACTAGTGGAGAAATCTCAGACCATATTTCAGGATGCCTTGGATACTGGAAACTGCAATGTGGTTCGTGTTCTAATGCGGCTTTTGACTGTTATGATGTGCAGTAAGGTTCTTCAACCGAGCTCTTTGGTGGCTGTCTTTGAAACATTTTTATCCTCAGCTGCCACAACAGTAGATGAGGAAAAAGGCAATCCCTTATGGCAGTCATGTGCAGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTTTTGAGCAAGTTCCTGAAGATATCGAGAGAGTGATAGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATCTGATTCTGGTTTATCCTTTTTCGAGAATGATGATGAAAGCGGGGAAGGTCTTAGTGACAAGGATTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTAGCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGGAAGTCTCATGAATTTGGGCCAATAAGCTGCCCCAGCCTACCAAAACCACCTTCAGTCTCTTCAGGCGTGTCTACTGGTAAACAGAAGCATGAAGCAGAATTAAAATACCCTCAAAGGATTCACCGGTTAAACATATTTCCTCCCAGTAAACATGAGGATCTACAACCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTCAATGGCTGTCGAAAGGAATGCGCCTCTTTCATGGTTGGTCTGCCAGTTTCCTTCAGATATGAGTACCTCATGGCCGAGACAATATTCTCTCAGCTGCTGATGCTACCTCAACCACCTTTCAGACCAGTATATTATACGCTTATTATTATTGACCTTTGCAAGGCTCTTCCTGGAGCTTTTCCTGCTGTTGTCGCTGGAGCAGTTCGGACTCTCTTCGAGAGGATAGCTGATTTGGATATGGAATGTCGAACACGTCTAATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCCTAGACCTCCCAAAGTGGGCTCCACAACGTGTCTTTGTCCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCGCCTCGTTTGGAAGAATTGCTTCCACCAAAGAGCGGGCCGAACTTTAGTTTTGGTGCAGAAGATGGTAAAGAAAGCAATGAGCATGAACTGTCTGGAAAGCTCAACAACATGGTTAAAGGGAAGTCACCTGTCCGTGAAATAATCTCTTGGATTGATGAAAGCGTGTTTCCAAATAATGGTCTAGAAGTTACCATTAGAGTGATTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATAACTGTCTTGGAGAGATATGGGCAAGTCTTTGCAAAAGTATGTCCTGACGAGGATCGACAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGACTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAGCAATTTCATACATCGGATCGTCCTTGGGAGATTCTTAGAAATGCCGTAAGCAAGACACACAATCGTATTTCTGATCTACGGAAAGAAATATTAACTATAAGAAAGAACATTTCATCAGCTGAAGAAGCTGCCAAGGAGGCAAAAGCAGAGCTAGATGCTGCAGAGTCGAAACTTACACTTGTTGATGGTGAACCAGTTCTTGGTGACAATCCTGTTAGATTGAATAGATTGAAATCACATGCTGAAAAGACAAAGGAGGATGTGGTGACTCTTCAAGAATCTTTAGAATCTAAGGAAGCTCTTCTTGTCCGAGCAATTGAGGAAAATGAGGCATTGTTTCTCTTGTTGTACAAAAGCTTCTCAAATGTGTTGACAGAGCGCCTTCCTGAAGGAACTAGAACACTGCATGAGTTGAAGTCTGCACAAGTAGATGTGATGGCAGTGGACACTGAAGAGCCACCATCAATGGAATTAGATGACGAAAACCAGAGATCTCAAAACAGTCAATCAAATGGAGAGAAGAAAGGTGGTGCTTATACTGTAGGTGAAAAGGAGCAGTGGTGTATTACCACTTTGGGTTATGTGAAGGCTTTTTCTAGGCAATATGCTGCTGAGATTTGGCCCCATGTTGAAAAGTTGGATGCAGAGGTATTGACAGAAGAAACACCTTTTCTTTTTAGGTCAGCTGTTTATACTGGTCTTCGTAGACCAATTCACGAGGCTTGA 2589 0.426 MTSWKNLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDHSQTDVLEFILMCAEHLSHKIPLYGTLIGLINLENEDFGKQLVEKSQTIFQDALDTGNCNVVRVLMRLLTVMMCSKVLQPSSLVAVFETFLSSAATTVDEEKGNPLWQSCADFYITCILSCLPWGGAELFEQVPEDIERVIVGVEAYLSIRKHTSDSGLSFFENDDESGEGLSDKDFLEDLWDRIQVLASNGWKVESVPRPHLSFEAQLVAGKSHEFGPISCPSLPKPPSVSSGVSTGKQKHEAELKYPQRIHRLNIFPPSKHEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFRPVYYTLIIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPKSGPNFSFGAEDGKESNEHELSGKLNNMVKGKSPVREIISWIDESVFPNNGLEVTIRVIVQTLLNIGSKSFTHLITVLERYGQVFAKVCPDEDRQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIRKNISSAEEAAKEAKAELDAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKTKEDVVTLQESLESKEALLVRAIEENEALFLLLYKSFSNVLTERLPEGTRTLHELKSAQVDVMAVDTEEPPSMELDDENQRSQNSQSNGEKKGGAYTVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEETPFLFRSAVYTGLRRPIHEA* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01160 862 Coils Coil 695 729 - -
Phac1g01160 862 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Phac1g01160 862 FunFam Nuclear cap-binding protein 296 481 - -
Phac1g01160 862 Gene3D - 299 481 - -
Phac1g01160 862 SMART if4_15 8 229 IPR003890 GO:0003723|GO:0005515
Phac1g01160 862 Pfam MIF4G domain 21 208 IPR003890 GO:0003723|GO:0005515
Phac1g01160 862 Pfam MIF4G like 498 826 IPR015174 GO:0016070
Phac1g01160 862 Gene3D - 3 269 - -
Phac1g01160 862 MobiDBLite consensus disorder prediction 781 796 - -
Phac1g01160 862 Gene3D - 490 846 - -
Phac1g01160 862 Coils Coil 644 685 - -
Phac1g01160 862 PANTHER CAP BINDING PROTEIN 3 843 IPR027159 GO:0000339|GO:0005846|GO:0006406
Phac1g01160 862 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Phac1g01160 862 MobiDBLite consensus disorder prediction 774 799 - -
Phac1g01160 862 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Phac1g01160 862 SUPERFAMILY ARM repeat 3 296 IPR016024 -
Phac1g01160 862 SUPERFAMILY ARM repeat 478 844 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01160 K12882 - gmx:100811738 1571.6