Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01147 ATGGTCAATGCGGCAGTGGTATTCGCCGTTTTGGTGGCGGCGATTTGGGTTGCGGAATCAGAGTACATAGAGTACAATACGACGCAGAGGATAGTACCAGACAAAATAAACGTGCACTTGGTACCTCACTCCCACGACGATGTTGGCTGGCTCAAGACCGTCGATCAGTACTACGTTGGAGCCAATAACTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTCTGTGATATCCTCGCTCTTGGAGGACAAGAATCGCAAGTTCATATATGTTGAGATGGCTTTTTTCCAAAGATGGTGGAGACAGCAAAGTAAAGCAATGAAAATTAAGGTCAAGGAGCTTGTCAACTCGGGTCAGTTGGAATTCATAAATGGGGGTATGTGTATGCATGATGAGGCCACTCCACATTACATTGATCTAATTGACCAGACCACGCTGGGGCATCAATTTATCAAAGAGGAATTTGATAAGGTTCCAAGAGTTGGTTGGCAGATTGACCCATTTGGCCATTCTGCAGTTCAGGCTTACTTGCTTGGTGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATTGATTACCAAGATCGAGCCAAGCGATTGAAGGAGAAGACTCTTGAGGTTATTTGGCAGGGTTGCAAGTCTCTTGGCTCTTCTTCACAGATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTTACGTTTGAGATAAATGATGTTTCACCTCCTATTCAGGATGACATTCTACTATTTGACTATAATGTTCAAGAAAGGGTCAACGATTTTGTATATGCCGCCTTAGCTCAGGCTAATGTGACCAAAACAAATCACATAATGTGGACAATGGGTACAGATTTCCGTTATCAATATGCTAATTCATGGTTTAGGCAGATGGATAAGTTCATTCACTATGTTAATCAGGATGGACGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAATATTGGCCTCTTAAAGTTGATGATTTCTTCCCGTACGCAGATCACCCAAATGCATATTGGACTGGATATTTTACAAGTAGGCCTGGTTTGAAGGGCTATGTGAGAGTGATGAGTTCTTACTATCAGGCTGCAAGGCAATTGGAATATTTTAAAGGGAGGAATGAAACAGGACCAAATACTGATGCATTAGCTGATGCTTTAGCAATTGCTCAGCACCATGATGCAGTTAGTGGCACAGAAAGACAACATGTTGCATCTGATTACGCGTTGCGTCTCTCATTGGGATATGAAGAGGCAGAAAGATTGGTTGCATCCGCACTTGCTTCCTTGGTAAATCAAAGATTAAGTTCCCATAAGATGAACCCAGTGAAAGATTTCCAACAGTGTCCTCTTCTTAATATAAGTTACTGTCCTCCATCAGAAACTACGTTGGTTAATGGAAAGAGCTTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAAGAGGGAAGATGTAATTCGAATTCCTGTTTCCGCTACACATGTTTCTGTTCAGGATTTGGATGGGAAGATAATTGAGTCTCAGCTTCTGCCTCTATCTAATGCTACTTTGACTATGAGAAAACATTATGTCAGAGCATATACAGGAAAAGCTCCTGGGAGCAACGTACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACCTATACAGTCACAAGCTCTGATCAATCTAATGATAGTTCAACTATCTCAAAGATGTCAAGTCCAGAAGGAAGTACTGATAAAAGCATAAAAGTTGGACAAGGGAATCTAATGCTACTTTATTCAGCAGATGAGGGAAAACTGACTCACTATGTTAACAGTAGATCCCTGGTTACAGCATCAGTTGAGCAATCCTACAGTTATTATTCTGGAAACGATGGGACTGATAAAGATCCCCAGGCTTCAGGGGCATATGTCTTCCGTCCAAATGGTTCGTTTCCCATTAAATCAGATCATCAGGTATCTTTTTCTGTCCTGCGTGGTCCAATATTGGATGAAGTTCATCAACAACTCAATCCATGGGTATCCCAGATTACTCGGGTATTCAAGGCAAAAGAACATGCTGAAATTGAGTTCACAGTTGGGCCTATACCAGTGGATGATGGCATTGGGAAAGAAATTATTACTCAATTTAAAACGACAATGAAGAGCAACAAGACATTCTACACCGATTCTAGTGGTCGTGACTTCATTAAGAGGATTCGAGATTTCAGGACAGATTGGGATCTACAAGTGAACCAACCCATAGCTGGAAACTATTACCCTGTTAATTTAGGAATATATATTCAAGATAGTAGTGTGGAATTCTCGGTGTTGGTGGACCGCTCAGTTGGAGGTTCCAGCTTGGAGGATGGCCAAATGGAGCTGATGCTCCATAGGAGGTTGCTTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCATTGCTGATAAGTGTGAGGGCTTAACGATTCAAGGAAAACTTTACCTTAGAATTGACCATAAAGGTGAAGGTGCCAAGTGGCGTCGCACAGTTGGCCAGGAGTTATATTCACCACTGATGTTGGCCTTCACAGAACAGGATGGGGATAATTCGTTACATTTCGCTGCATCAACATTTTCAGGCACAGATTCTTCCTACAGTTTACCAAACAACATTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCGTGAGATTGGCTCACCTTTATGAGATTGGAGAGGACAATAATTACTCAGTAATGGCTAGTGTGGAATTGAAAAAGTTGTTTCCTAACAAGAAGATAAATAAAGTGACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGTTGAAATGGAAAAGAGGAAGTTAGATTGGAAGGTAGAAGGTTCCACTGATGAACCTAAGGTGGTGAGGGGAGGACCTGTTGATCCTACAAACTTGGTGGTTGAACTTGCTCCAATGGAGATCCGGACATTCTTCATTGACTTTAATCCCCTTCAAACAGTTGCTGAAGCAGAAAATCATATGGCAAATTATCAAAGCATCCAATAA 3084 0.416 MVNAAVVFAVLVAAIWVAESEYIEYNTTQRIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISSLLEDKNRKFIYVEMAFFQRWWRQQSKAMKIKVKELVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKEEFDKVPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVIWQGCKSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDILLFDYNVQERVNDFVYAALAQANVTKTNHIMWTMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEYWPLKVDDFFPYADHPNAYWTGYFTSRPGLKGYVRVMSSYYQAARQLEYFKGRNETGPNTDALADALAIAQHHDAVSGTERQHVASDYALRLSLGYEEAERLVASALASLVNQRLSSHKMNPVKDFQQCPLLNISYCPPSETTLVNGKSLVIVVYNPLAWKREDVIRIPVSATHVSVQDLDGKIIESQLLPLSNATLTMRKHYVRAYTGKAPGSNVLKYWLAFPVSVPPLGFSTYTVTSSDQSNDSSTISKMSSPEGSTDKSIKVGQGNLMLLYSADEGKLTHYVNSRSLVTASVEQSYSYYSGNDGTDKDPQASGAYVFRPNGSFPIKSDHQVSFSVLRGPILDEVHQQLNPWVSQITRVFKAKEHAEIEFTVGPIPVDDGIGKEIITQFKTTMKSNKTFYTDSSGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGIYIQDSSVEFSVLVDRSVGGSSLEDGQMELMLHRRLLHDDARGVGEVLNETVCIADKCEGLTIQGKLYLRIDHKGEGAKWRRTVGQELYSPLMLAFTEQDGDNSLHFAASTFSGTDSSYSLPNNIALLTLQEFKNGKVLVRLAHLYEIGEDNNYSVMASVELKKLFPNKKINKVTEMSLSANQERVEMEKRKLDWKVEGSTDEPKVVRGGPVDPTNLVVELAPMEIRTFFIDFNPLQTVAEAENHMANYQSIQ* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01147 1027 Gene3D - 884 1009 - -
Phac1g01147 1027 FunFam Alpha-mannosidase 599 864 - -
Phac1g01147 1027 FunFam Alpha-mannosidase 473 599 - -
Phac1g01147 1027 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Phac1g01147 1027 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Phac1g01147 1027 SUPERFAMILY Galactose mutarotase-like 452 1007 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phac1g01147 1027 Pfam Glycosyl hydrolases family 38 C-terminal domain 602 816 IPR011682 GO:0004559|GO:0006013
Phac1g01147 1027 Gene3D - 599 864 - -
Phac1g01147 1027 FunFam Alpha-mannosidase 36 316 - -
Phac1g01147 1027 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Phac1g01147 1027 MobiDBLite consensus disorder prediction 573 598 - -
Phac1g01147 1027 FunFam Alpha-mannosidase 884 1009 - -
Phac1g01147 1027 SUPERFAMILY Families 57/38 glycoside transferase middle domain 352 447 IPR028995 -
Phac1g01147 1027 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 898 1004 IPR041147 -
Phac1g01147 1027 SUPERFAMILY Glycoside hydrolase/deacetylase 25 351 IPR011330 GO:0005975
Phac1g01147 1027 PANTHER ALPHA-MANNOSIDASE 8 1008 - -
Phac1g01147 1027 CDD GH38N_AMII_LAM_like 36 312 - -
Phac1g01147 1027 FunFam Alpha-mannosidase 315 395 - -
Phac1g01147 1027 Gene3D Glycoside hydrolase family 38, central domain 317 395 IPR037094 GO:0004559|GO:0006013
Phac1g01147 1027 FunFam Alpha-mannosidase 396 451 - -
Phac1g01147 1027 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Phac1g01147 1027 Gene3D - 471 598 IPR013780 -
Phac1g01147 1027 Gene3D Glycoside hydrolase family 38, central domain 396 451 IPR037094 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01147 Phac-Chr1 11386721 11424169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01147 10 947 Glycoside Hydrolase AT3G26720 72.766 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01147 K01191 - gmx:100795651 1884.77