Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00976 ATGCCAACTGCCCCCGACCAAAAATTTAAGCTAGAAAATAGACACCGCACAGAAAATCCTTCGTTCTTCCTGTCTTTCGAGATTTCTTCACTTGTTTCTAAGACAACTTTTCCTTGTATCATTGCAACCTTTTTTCCCTTTTCATTCATAAAGTTCTTTCCAACGATGGATTTTAGAAGCAAGGGAATAACACTGCACTCGCTTTTCGTATCATTTCTTCTATTTTCTGCCATTTTCCCACTCTCTTTCTCAGCAGCCAATCAACCCCACAAAGTCAAGAACCTCGCCACCCCACGTCGCCTTTCCTCCTCAGCTGTTTTCAAAGTTCAGGGAAATGTGTACCCTCTTGGGCATTACACAGTGTTTTTCAACATTGGCCATCCGCCCAAGTTTTACGACCTTGACATAGATTCGGGTAGTGACATCACTTGGGTTCAATGTGATGCACCATGTAAAGGTTGCACCAAGCCTCGTGTGCAACTTTATAAACCCAATGACAACCTTGTGCAATGTGTGGACCAATTGTGTTCTGAAGTGCACTTATCAACAGACCATAATTGTGCTTCCCCACATGACCAATGTGACTATGAAGTTGAGTATGCAGATAATGGATCATCTCTGGGTGTGCTAGTCCGGGACCACATTGCTTTTCAATTCACCAATGGCTCTGTGGTGCACCCTAAGATTGCCTTTGGGTGCGGATATGATCAAAAGTATTCTGGTTCTACCTCCCCACCTTCTACGGCAGGAGTCCTTGGCCTTGGCAATGGCAGAGCTAGCATTTTAACTCAGCTTCATTCTTTGGGTCTGATACGCAATGTAGTTGGACACTGCCTAAGTGCAAGAGGAGGAGGGTTTTTATTCTTTGGAGATGATCCCGTTCCCTCTTCAGGAATTGTTTGGACATCCATGGTGCATAGTTCTTCGGACTCAGGACCAGCAGAGCTGTTGTTCAATGGAAAGGCTACTGAAGTTAAGGGTCTTGAACTTATCTTCGATAGTGGGAGCTCTTACACATACTTCAACTCCCTGGCGTATCAAGCTGTTGTAAATTTGGTGACTGATGATTTAAAGGGGAAACAGTTGACTAGAGCAACCGAGGATCCATCACTTCCAATTTGTTGGAAGGGTCCAAAATCTTTCAAATCGTTAAGTGATATCAAGAAATACTTCAAACCCCTTGCATTTAGCTTCACAAACACTAAGAATGTGCAGATGCAGCTACCGCCAGAAGCTTATCTTATTATCACTAAACATGGCAATGTTTGCTTGGGGATTCTAGATGGCACTGAAGTAGGACTAGAAAGTCTCAACATAATCGGAGACATCTCTTTACAAGACAAAATGGTCATTTATGACAACGAGAAGCAGCAGATTGGATGGGTTTCTGCAAATTGTGATAGGCTTCCCAATGTGGATCGTGATTTGGAAGGTAATCCACACCCATACGCAGCCAATTTGGGTATCTTTGGGAACAGTTTCCCTGCATCTTTTGAAAATATAGACGATCAATGA 1515 0.4323 MPTAPDQKFKLENRHRTENPSFFLSFEISSLVSKTTFPCIIATFFPFSFIKFFPTMDFRSKGITLHSLFVSFLLFSAIFPLSFSAANQPHKVKNLATPRRLSSSAVFKVQGNVYPLGHYTVFFNIGHPPKFYDLDIDSGSDITWVQCDAPCKGCTKPRVQLYKPNDNLVQCVDQLCSEVHLSTDHNCASPHDQCDYEVEYADNGSSLGVLVRDHIAFQFTNGSVVHPKIAFGCGYDQKYSGSTSPPSTAGVLGLGNGRASILTQLHSLGLIRNVVGHCLSARGGGFLFFGDDPVPSSGIVWTSMVHSSSDSGPAELLFNGKATEVKGLELIFDSGSSYTYFNSLAYQAVVNLVTDDLKGKQLTRATEDPSLPICWKGPKSFKSLSDIKKYFKPLAFSFTNTKNVQMQLPPEAYLIITKHGNVCLGILDGTEVGLESLNIIGDISLQDKMVIYDNEKQQIGWVSANCDRLPNVDRDLEGNPHPYAANLGIFGNSFPASFENIDDQ* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00976 504 PANTHER ASPARTYL PROTEASES 99 460 IPR001461 GO:0004190|GO:0006508
Phac1g00976 504 FunFam Aspartic proteinase Asp1 isoform A 295 470 - -
Phac1g00976 504 PRINTS Pepsin (A1) aspartic protease family signature 125 145 IPR001461 GO:0004190|GO:0006508
Phac1g00976 504 PRINTS Pepsin (A1) aspartic protease family signature 330 341 IPR001461 GO:0004190|GO:0006508
Phac1g00976 504 PRINTS Pepsin (A1) aspartic protease family signature 438 453 IPR001461 GO:0004190|GO:0006508
Phac1g00976 504 ProSiteProfiles Peptidase family A1 domain profile. 119 462 IPR033121 -
Phac1g00976 504 SUPERFAMILY Acid proteases 111 471 IPR021109 -
Phac1g00976 504 FunFam Aspartyl protease family protein 95 291 - -
Phac1g00976 504 Pfam Xylanase inhibitor C-terminal 329 461 IPR032799 -
Phac1g00976 504 Gene3D Acid Proteases 95 291 IPR021109 -
Phac1g00976 504 Pfam Xylanase inhibitor N-terminal 119 291 IPR032861 -
Phac1g00976 504 Gene3D Acid Proteases 312 471 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00976 Phac-Chr1 8929179 8932622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00976 74 470 Miscellaneous Gene Families AT1G77480 57.463 3.84e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00976 - - gmx:100790299 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00976 1 8929179 8932622 Phac1g00976 1 8929179 8932622 ECH