Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00864 ATGTTCCCATTCAACCACTTCAACAGCAACACCATCAACAGCAACAGCGACACCACCTTTTTCTCCGTTGGTGGCGGTGCCGACTGCAAGTTCTGGTTAATGGCCGCTGCAGCCTCGCCCTCTACTCCGGCGGTGGTTTTCACCGCTCTCGCCGGCGTCGTCATCGTCGCCGCGATATTCTACGGCGCCAGTAGGGGGCGGCTTAAATCACCATGGTCACAAAGGAAAAGAAAACATGCTCTGTCATCTCAGCAATGGAAATGCTTGTTTACAGAAGATGGTAAATTCTGTGATGGTGGAAATAAGTATGACTTGGGCAGCAGCAAAGACGAAAGAGATGTTATAAGAACTCAAAATAGAAAGCAGTATGAGAAACTCCGTAGACAATGTCGGAAACTCGTCAAGCAAATTAATGAGAGAAATAAGTTAAATGAAGTTGGTGAAATCAGCTTTGAGGGAGATGGTAAAAGTCTGTCTCCAGATTCTGGTTCTTCCAGTTCTGAGGATGCAGCCAGTGCTAGGGAATCTCTTTCTAGTGAGGATAGGATCCCTGATGTTGAACATTCTGACAATCTGTCTAGTCCCCTGTTGGAAGGGGAAGATGTTCCTAATGCAAACAACGCTGATGCCTCTACACTGGATACTGATTTCTCTGATTCGGACTCCTCTGAAGGTCCTGAAGTTATTCAGGCAGTTCCTTCTGATGATGTTCAGGAACATAACAATCCAAACGAAGCTTCCCAGGAAGTATCTTCTCCCACCAAAGCAAAAATCCCATCAAAGGCACTAACCAATGAAGATTTTTCCACCTGGCAACGAATTATCCGACTTGATGCAGTACGGGCCAATGCTGAATGGATGTCATGTTACCCATCTCATCCCTCTTTATCAGACAGTAGGGCACGTCGAACTGCTGAGGCTGTTGGCCTGAAGGATTATGGTCACCTAGAGGCTGGCAGAATATTCCATGCTGCTAGACTAGTTGCTATTCTTGAAGCATATGCACTATATGACTCTGACATTGGCTACTGCCAAGGTATGAGTGACCTGCTATCTCCTATAGTTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAAGTGGGTATTCGCAGGCAACTGGATTTAGTCGCAAAAATAATCAAGTTTAAGGATTCCCACCTTTTTAGGCATTTGGAAAAGCTTCAGGCTGAGGATTGTTTTTTTGTCTATAGAATGGTGGTGGTAATGTTTCGAAGGGAATTGACATTTGAACAGACCCTTTGCCTATGGGAAGTGATGTGGGCGGATCAAGCGGCAATCAGGGCAGGTATTGGGAAATCTGCGTGGAGCAGAATTAGGCAGCGTGCACCACCAACAGAAGATTTATTGCTTTATGCAATTGCAGCTTCGGTGTTGCAGAAGAGGAAATTGATCATTGAGAAGTACAGCAGCATGGATGAGATCATTAGGGAATGCAATAGTATGTCAGGTCATCTTGATGTTTGGAAACTGCTTGATGATGCACATAACTTAGTGGTCATCCTGCATGACAAAGTAGAGACATCATTCTCATGA 1605 0.4486 MFPFNHFNSNTINSNSDTTFFSVGGGADCKFWLMAAAASPSTPAVVFTALAGVVIVAAIFYGASRGRLKSPWSQRKRKHALSSQQWKCLFTEDGKFCDGGNKYDLGSSKDERDVIRTQNRKQYEKLRRQCRKLVKQINERNKLNEVGEISFEGDGKSLSPDSGSSSSEDAASARESLSSEDRIPDVEHSDNLSSPLLEGEDVPNANNADASTLDTDFSDSDSSEGPEVIQAVPSDDVQEHNNPNEASQEVSSPTKAKIPSKALTNEDFSTWQRIIRLDAVRANAEWMSCYPSHPSLSDSRARRTAEAVGLKDYGHLEAGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIVSVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEIIRECNSMSGHLDVWKLLDDAHNLVVILHDKVETSFS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00864 534 MobiDBLite consensus disorder prediction 174 188 - -
Phac1g00864 534 FunFam GTPase-activating protein gyp7 isoform X1 383 528 - -
Phac1g00864 534 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 247 379 - -
Phac1g00864 534 Coils Coil 116 143 - -
Phac1g00864 534 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 258 407 IPR035969 -
Phac1g00864 534 SMART tbc_4 73 492 IPR000195 -
Phac1g00864 534 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 384 521 IPR035969 -
Phac1g00864 534 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 249 379 - -
Phac1g00864 534 Pfam Rab-GTPase-TBC domain 326 446 IPR000195 -
Phac1g00864 534 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 77 502 - -
Phac1g00864 534 MobiDBLite consensus disorder prediction 157 173 - -
Phac1g00864 534 MobiDBLite consensus disorder prediction 205 227 - -
Phac1g00864 534 MobiDBLite consensus disorder prediction 235 261 - -
Phac1g00864 534 MobiDBLite consensus disorder prediction 151 261 - -
Phac1g00864 534 Gene3D - 383 530 - -
Phac1g00864 534 ProSiteProfiles TBC/rab GAP domain profile. 261 447 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00864 Phac-Chr1 7356963 7361192 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00864 - - gmx:100789579 868.611