Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00739 ATGCTCTCTCGTTCTCTCAAACCCCCTTACTCACTCTTCTCCCTCCGTTCATATCTCGTTCCAAACCCAATTCCTAACCTAAACCCTTCAATCCGACCCTCCCTACACCGTCTCTTCTCTTCTTCATGGCTATCCGAACCGGGAAATCCAATCATCCAATGGCCATCACTACCCACCCCAAACCCTCCTCCAAATCCCAACCCCAAGCCTACACCCGACCCTACCTCTCCAAACCTAAACGCATTCTCCCTCATTTCCAACCTCTTCACGGACCCTTCCGTCTCGCCCGGTCCGGTCCTCCACGCCAAACTCGACCGCTCTGCCATCGAACCGGACCCGGCTCTCCTTCTCGCCCTCTTCGACCGCTTCGGCTCGTCCCCCAAGCTCCTACACTCGCTCTTCCTCTGGGCCCAGACCCGACCCGGCTTCAGGCCCGGCCCGAAGCTGTTTGACGCCGTCGTCAATGCTCTCGCGAAGGCAAGGGAGTTTGACGCCGCGTGGAAACTCGTTCTCGATAACGTCGATGGAGATGGGGAAGAGGAAAACGAAAGCTTGGTTTCTGTTGGGACCTTTGCCATCATGATTCGACGCTATGCGCGTGCAGGTATGTCCAAACTTGCAATTAGAACTTATGAATTTGCTAAAAATAACAAGTCAATTGTGGATTCTGACTCAGAAATGAGTTTATTTGAGATATTGATGGATTCACTTTGTAAAGAAGGGTCTGTGAGGGAAGCCTCAGAGTATTTCCTTTGGAGAAAGGAGTTGGACTTAAGTTGGGTTCCTTCTGTTCGGGTTTATAACATAATGTTGAATGGATGGTTTCGATCGAGGAAACTCAAGCAGGGTGAGAGACTTTGGGAAGAGATGAAGAAGGAGAATGTGAGACCAAGTGTTGTGACATATGGTACCCTCGTGGAAGGATATTGTCGGATGCGCCGTGTTGAGAAAGCACTTGAAATGATTGGTGATATGACCAAAGAAGGAATTGCACCAAATGTAATTGTATACAACCCAATAATTGATGCACTTGCAGAAGCTGGAAGATTCAAAGAGGCTTTGGGTATGTTGGAACGATTTCATATTTTGGAAATTGGCCCTACTGATTCAACATACAATTCTCTCATAAAAGGGTTTTGTAAGGCAGCAGATCTTGCAGGTGCTAGTAAGATTCTTAAAATGATGATAAGTAGGGGTTTCATCCCAAGTCCCACTACCTATAACTACTTTTTTCGGTACTTTTCAAGATGTGGAAAAATTGAGGAGGGGATGAACCTGTATAGAAAGATGATTGAGTCTGGTTATACCCCAGATCGGTTAACATACCATCTTTTGGTGAAGATGTTATGTGAAGAGGGGAAGTTAGACTTGGCAGTTCAAGTTAGCAAGGAAATGAGGCATAATGGATATGACATGGACTTGGCTACCAGTACCATGTTAATTCATTTGCTTTGCAAAATGCATAGGTTGGAAGAGGCTTTTGCTGAATTTGAGGACATGATAAGAAGGGGTATAGTTCCTCAGTATCTCACTTTCCAGGGAATGAAAGCTGAGTTAAAGAGACAAGGTATGACTGAAATGGCTCAAAAGCTTTGTAAGTTGATGTCTTCTGTTCCCTATTCTGACAACTTGCCAAATACTTATGGTGGAGACAGAGAAGATGCTCTTACACGAAGAAAATCTATAATTCGGAAAGCCAAAGCATTTTCTGATATGCTGAAGGACTGTAAGGATCCAAGTGAACTTCGTCAGTGTAAAAATTCATCAGAAAATGCTGTCTCAAGCGCAAATTCTATGATAGAGGATATTGAGGGAAAATGA 1821 0.4503 MLSRSLKPPYSLFSLRSYLVPNPIPNLNPSIRPSLHRLFSSSWLSEPGNPIIQWPSLPTPNPPPNPNPKPTPDPTSPNLNAFSLISNLFTDPSVSPGPVLHAKLDRSAIEPDPALLLALFDRFGSSPKLLHSLFLWAQTRPGFRPGPKLFDAVVNALAKAREFDAAWKLVLDNVDGDGEEENESLVSVGTFAIMIRRYARAGMSKLAIRTYEFAKNNKSIVDSDSEMSLFEILMDSLCKEGSVREASEYFLWRKELDLSWVPSVRVYNIMLNGWFRSRKLKQGERLWEEMKKENVRPSVVTYGTLVEGYCRMRRVEKALEMIGDMTKEGIAPNVIVYNPIIDALAEAGRFKEALGMLERFHILEIGPTDSTYNSLIKGFCKAADLAGASKILKMMISRGFIPSPTTYNYFFRYFSRCGKIEEGMNLYRKMIESGYTPDRLTYHLLVKMLCEEGKLDLAVQVSKEMRHNGYDMDLATSTMLIHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFQGMKAELKRQGMTEMAQKLCKLMSSVPYSDNLPNTYGGDREDALTRRKSIIRKAKAFSDMLKDCKDPSELRQCKNSSENAVSSANSMIEDIEGK* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00739 606 MobiDBLite consensus disorder prediction 580 606 - -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Phac1g00739 606 Gene3D Tetratricopeptide repeat domain 326 396 IPR011990 GO:0005515
Phac1g00739 606 Gene3D Tetratricopeptide repeat domain 467 538 IPR011990 GO:0005515
Phac1g00739 606 Gene3D Tetratricopeptide repeat domain 99 252 IPR011990 GO:0005515
Phac1g00739 606 Gene3D Tetratricopeptide repeat domain 397 466 IPR011990 GO:0005515
Phac1g00739 606 Gene3D Tetratricopeptide repeat domain 253 325 IPR011990 GO:0005515
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 473 507 IPR002885 -
Phac1g00739 606 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 114 538 - -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 438 472 IPR002885 -
Phac1g00739 606 Pfam PPR repeat 232 250 IPR002885 -
Phac1g00739 606 Pfam PPR repeat 476 505 IPR002885 -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Phac1g00739 606 SUPERFAMILY HCP-like 244 470 - -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Phac1g00739 606 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Phac1g00739 606 MobiDBLite consensus disorder prediction 53 77 - -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 335 364 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 300 334 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 441 473 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 406 438 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 478 507 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 266 298 IPR002885 -
Phac1g00739 606 NCBIfam pentatricopeptide repeat 371 403 IPR002885 -
Phac1g00739 606 MobiDBLite consensus disorder prediction 53 75 - -
Phac1g00739 606 Pfam PPR repeat family 406 450 IPR002885 -
Phac1g00739 606 Pfam PPR repeat family 332 381 IPR002885 -
Phac1g00739 606 Pfam PPR repeat family 262 311 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00739 119 535 Miscellaneous Gene Families AT4G11690 25.532 3.77e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00739 - - gmx:100793484 1004.97