Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00684 ATGGATCCAATTAACCTTTTACCTGCTGATGGGGTTGAAGTGGTCCACCAAAATGGGGTCCACGATGAACCTTCAAATTCTGGGGAGGATGGTGGTGCTTCATATGATTTAGACCCCAGTGTCACTGAAACTGCAGAAACTGTAGCTTCAAATGGAAATTTTGATAATGTCCATCAGTCAGATAGTGCTGCAATTGATAACTTATTTGTGGCACAAATCAAAGAATCAAATGACATTATTGATGGCAATAACATGATCATTACTAAGGAAGAGGATATGAAAATATCAGATCAAACAAAACAGTCAAGGGCACCAAAAGGTTTTGTGAAGAATAAGAATGCAAAGGCTCCAAGTTCCAGTGGTGTTCATGCAGGTTTGGTGAATAAGAGCAAAATTAGAAAAGATAAAGAAGCATCCTCATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCCCAAAACAGTCTATTAAAAGCAGCAGATCATTCAATGATCGGCAGACTGAATTGTCCAATCCCAAGCACCCTTTGAAGTCTGACGAAACATCTTCTGAAGTATCAATGGAGAAGACAAAAACAAAATCATTGAGAAAAGGACCTGTTAAAGATCAAGAAATAGATTCTTCCTTAAGTACCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGCGAACGAGCCGAGAGAAGAAAAGAGTTCTATGATAAACTCGAGGAAAGGATTCAGGCAAAGGAAGTGGAGAAGAATAATATGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCAAGCTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGACCAAAATCTCCCAAGTTTGGTCGTAAGAAGACTTCAGCTAATTCAGAGTCTGATGGAAACAATAGCAGTGGTTCAAGATTAGCTCGTTTAAGTCTGGATGAGAAAGTGTCAGAGAGTAACCCCAGCAAGGGACCTAATCCTGTCCTTCAAAAGAAGCCGCAGCGAAGATCTCTTCCTTCTCGCCTTGCCTCCGAAAGGAACAGTGTATCAAAATCAACAACTTCACATACTTCATCCAAGGCTATCAAAGATGAAAAGTCTTCCTTATCTCATGCTGCTAAAAAGGATACTATCATATCCAATGCCACAGGAGAAGTGAAAACCAACACGGTTGCAGCAAATGAGGAGAAAAGTATCTTGTCCAGTCAAACAATTGATGTTGTGCCTCTGAATGTGGTTCCTTCGGATAATAAGCCAAGTGAAGACTTTCATGTGAATGTTGATATAGCAGTTGAAGAGAATCCTCTGCCCCCCTTGGCACAAGAACCTGTTGCCGCACAGCAATGA 1434 0.4066 MDPINLLPADGVEVVHQNGVHDEPSNSGEDGGASYDLDPSVTETAETVASNGNFDNVHQSDSAAIDNLFVAQIKESNDIIDGNNMIITKEEDMKISDQTKQSRAPKGFVKNKNAKAPSSSGVHAGLVNKSKIRKDKEASSSVSNGTLALDSRPKQSIKSSRSFNDRQTELSNPKHPLKSDETSSEVSMEKTKTKSLRKGPVKDQEIDSSLSTNNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYDKLEERIQAKEVEKNNMQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNNSSGSRLARLSLDEKVSESNPSKGPNPVLQKKPQRRSLPSRLASERNSVSKSTTSHTSSKAIKDEKSSLSHAAKKDTIISNATGEVKTNTVAANEEKSILSSQTIDVVPLNVVPSDNKPSEDFHVNVDIAVEENPLPPLAQEPVAAQQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00684 477 Coils Coil 245 272 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 387 401 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 317 337 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 369 386 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 255 415 - -
Phac1g00684 477 PANTHER PROTEIN WVD2-LIKE 4 95 437 IPR044833 GO:0008017
Phac1g00684 477 MobiDBLite consensus disorder prediction 255 280 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 91 231 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 17 40 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 171 204 - -
Phac1g00684 477 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Phac1g00684 477 MobiDBLite consensus disorder prediction 205 220 - -
Phac1g00684 477 MobiDBLite consensus disorder prediction 139 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00684 Phac-Chr1 5455591 5461293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00684 - - gmx:100786958 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00684 1 5455591 5461293 Phac1g00684 1 5455591 5461293 ECH
Phac1g00684 1 5455591 5461293 Phac9g00384 9 2456400 2463207 PCT