Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00671 ATGGCTTTCTCCGTTTCACTTCGCCCTACCACTTCTCCATCTCGCTCGCAGCTGTTTTGCTCTGTTAAGTTCAGTAGTAGGCGTCGTAGTAGCCGATTAGGTTTTGAGGCGGACGGCGGGAGAATATGTCGTCGTTTACGGAACAGTGTTAGTGTTAGGTCGGTGTTGAAAGACAATAGGCCTAGCGTGAACGATTATGGAGCGGCGGAGTCTGCTAGGGTTTTGTTCGAGAGGTTGTTCGATCCGACGCAGAGCCGGTTCAGCGGAGAGGAACCGGATCTTCGGATTCTGGAATCGGATCTCGAGGCGGTGCTGTCGGCGCTGAAGAAGAAGGAGGATCACTTGATGGAGGCGGAGAGGACGGTGTTGTTGGAGAATAGTAAGTTGAAGCACACGAAGGAGGAGTTGGAGCGGCAAGAGAGTGAGATTGAGGCTGCTAAGGATAGGTATGAGAAGCTCCAGGAGGAGATGAAAGAGACTACTGCTGAATTGGTTGCTCAGGCGAGCCAGGTTGAGGAGCTGAAGCTTAAGGTTAGGGATCGGGATCATGAGATTGATGCGGTCCAGTATGGTTTGAGGTTGAAGGAGGAGGAAGTGGAGAAAATGAGGGTTGAATTGGACGTGAAGAGTCAGGAGGTTGCGGTTCTTGAATCTGAGCTTAGAGAGAAAGGGAAGCTTCTGGATGAAGCCAACGAGATTATGAAGAAACAGAGGGCTGAGCTTGAGGAGCTGAAGAAGGCGGTTGGAGAGAAGGAGGAGGAGATTGAGGTCTTTCTGGTTCAGAGGGAGGTTGAGAGGGAGAAGCTGAAGGTTGCCGAGGCGAATTTAGAGAAGCAGGCAATGGATTGGTTGTTGGCGCAGGAGGAGCTTAAGAGTCTGGGAGAGGATGCTGCGAGGCATGCTAAGGAGAGTAATGAGACTTTGGATGATTTCAGAAGGGTGAAGAAGCTTCTGAATGATGTGAGGTCTGAATTGGTTAATTCTCAACAAGCATTGGCGTCTTCTAGAAGCAAAATGGAAGAGCAAGAACGGTTGTTGGAACAGCAGCTGTCTGAGCTTTCGGAGCAGAGGGCAAGTGTTATGTCATACATGGAAAATTTAAAGGATGCACAGACAGAAGTGGAGAGTGAAAGAACAAAACTCAGGGTTGCCGAGGCTAGGAACAAAGAGCTTGAACGAGATCTGAAGATGGAAATGGAGCTTATCAGTGAGTTAGAGGAGGAGTTGAAGAAAGAGAGAGCTTCTTTAGAACAGGCAGTCACGGAAATGGATTTGCTTCAGCGGGAACTGGAGAAACGAAGTGCTGAATTTAGAGAAAAAAGTGCCGTTCTTCAGGTCAAAGAATCAGAGCTCGTTGATGCTAAACTAGAAATCCAGCGTTTGAAATCTGAGAAAGCTTCCCTGCAGGGTATCTTGGAGGAGAAAGACGTGGAGCTTTCCAGTGCTAGAAAGATGATGGTGGAAGTTAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAGCAAAGAAACGCAGCTTATTGAAGCAACCAATATGCTAAGGGAGAAAGATGAGCATGTGATGATAATCCAGAGCAAGTTGGATGATACAAACCAGAAGGCTGTCGAAGCTAAAACGGTGGTTGAAAGAATTTTAGATCTTACAAACAAACTGGTTGCTTCCATTAAGGATGAAGACATGAACTCATCGAGACCACTGCTAGATGGGATTGGTAATCAACTACTTGAGCAACTATCGGAGGAACCTGCTAATGAAATGAGATGGCAACAGAAAAGACTTGAGAATGAACTTGAGTTGGCCAAGGAAAACTTGAAAGAAAAGGAGATGGAGGTTCTTGCTGCACAGAGAGCTCTAACAATAAAAGATGAGGAGCTGAAAAAGACTCTTTCAAGATTGGATGCAAAAGAGGAAGAGTTGAAAAAAGTAAGGGAAGAGGTGACAGAAGATTCTAATGATCTTAAAAGGCTGTATGCTTTGGCACAGGAGAAAATTGGCGAGGCAAGCTTAGGAGATTTGGCAATTGAGAAACTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTGCCACCAATGCTCTGCAAAAACTTGCCGAAATGAGTCGTGAACTTCTGAATAAGGCTATCCTGAGTGCTGAAGCTGATAACTATATCAGTCTTGTGCCAATTAATGAAAAAAATCCGAATTCGATCAGCGATGCCATTAAATCTGACTATTTCTCTGAGGTAAAAGCAGGAGTGGCTCGACTCTCAGCTTTGTCTGAGCAGCTTGTGATGGAGGCAGGCATTGCTTCTGCAAATGAAGAAGGTTGTGAAGATGTCCTGTATTTCGATATCTGTGACAAAAGCCAATCCAAAGTTAACCTGTCTTTTGGTGGATGA 2382 0.4584 MAFSVSLRPTTSPSRSQLFCSVKFSSRRRSSRLGFEADGGRICRRLRNSVSVRSVLKDNRPSVNDYGAAESARVLFERLFDPTQSRFSGEEPDLRILESDLEAVLSALKKKEDHLMEAERTVLLENSKLKHTKEELERQESEIEAAKDRYEKLQEEMKETTAELVAQASQVEELKLKVRDRDHEIDAVQYGLRLKEEEVEKMRVELDVKSQEVAVLESELREKGKLLDEANEIMKKQRAELEELKKAVGEKEEEIEVFLVQREVEREKLKVAEANLEKQAMDWLLAQEELKSLGEDAARHAKESNETLDDFRRVKKLLNDVRSELVNSQQALASSRSKMEEQERLLEQQLSELSEQRASVMSYMENLKDAQTEVESERTKLRVAEARNKELERDLKMEMELISELEEELKKERASLEQAVTEMDLLQRELEKRSAEFREKSAVLQVKESELVDAKLEIQRLKSEKASLQGILEEKDVELSSARKMMVEVNQEISDLKMLMNSKETQLIEATNMLREKDEHVMIIQSKLDDTNQKAVEAKTVVERILDLTNKLVASIKDEDMNSSRPLLDGIGNQLLEQLSEEPANEMRWQQKRLENELELAKENLKEKEMEVLAAQRALTIKDEELKKTLSRLDAKEEELKKVREEVTEDSNDLKRLYALAQEKIGEASLGDLAIEKLQLEAAQLEVEAATNALQKLAEMSRELLNKAILSAEADNYISLVPINEKNPNSISDAIKSDYFSEVKAGVARLSALSEQLVMEAGIASANEEGCEDVLYFDICDKSQSKVNLSFGG* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00671 793 Coils Coil 673 707 - -
Phac1g00671 793 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 78 704 - -
Phac1g00671 793 Coils Coil 192 261 - -
Phac1g00671 793 Coils Coil 101 177 - -
Phac1g00671 793 Coils Coil 584 664 - -
Phac1g00671 793 Coils Coil 325 436 - -
Phac1g00671 793 Coils Coil 444 506 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00671 - - var:108336972 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00671 1 5382275 5385542 Phac1g00671 1 5382275 5385542 ECH