Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00476 ATGACAAGTGTTGAGATAAATGTGGCAGCACCAATGTACTACAAAGGAGTTTACCACTTTTTCTACCAACATAATCCTCATGCAGCAACCTTCGGTGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAACTGGATTCATCTGGACCATGCTATTGAGCCAAGTGAACAGTTTGACTTCAACGGTTGTTGGTCGGGCTCAGCCACTATAATCCCAGGCAAAGAAAAACCTGTTATTTTGTACACAGGAATTGATGATAAAAAACACCAAGTTCAAAACATAGCTATGCCAAAGAATCCATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGTAGTTCTTTACCACAGTGAGGATTTTGCTAATTGGACAGTGGAATTGAAACCTTTTTTTGCATCAGATAATACTGGAATTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATAGCACAAATGGGGTGGATACATCTGTTCAAAATCAAAGTGTTAGACATGTATTAAAGATAAGCTATCTACGGGTACATCAGGACTATTATTTTCTTGGTAAATATGCCAATGATGATGGAAACTTTATTCCTGATGTTAAATTCACAGGAACTAGTTTGGACTTAAGGTTAGACTATGGTAAATTTTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAGCAGAAGGATATTATGGGGGTGGGTGGACGAATGTGACACTAGCCATGATGACATTGAGAAAGGATGGGCTGGTCTTCAGTGTATTCCAAGACAAGTTTGGCTTGATGAAAGTGGAAACAGGCTAATGCAATGGCCAATTGAAGAGATAAAAACACTACGTGACAAACACATTAGCATAGTGGGAGAGAAACTGGTTGGTGGATCAATTATTGAAATCTCAGGTATCACTGCATCGCAGGCTGATGTAGAAGTGTTGTTTGAGCTACCAGAACTAGAGAATGCAGAGTGGCTAGAAGAAAGGGAAGTTGATCCTCGATTATTGTGTAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCATCTGAAGACCAAACAGAACTCACTGCAATCTTCTTCAGAATATATAAAACCTCCAATAGATATGTATGTTTCATGTGCAGTGACCAAAGCAGGTCTTCATTGAGGCAGGACCTTGATAAAACCACAGAGGGAACTATCTTTGACATAGACCCCAATCAAAAAACAATTTCACTGAGAAGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACCAGTAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTATGTATTCAACAATGGAAGGCAGAGTGTGGTGATCTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGGCCAAGAGGAAAGCATACATAAGCAGTAG 1584 0.4034 MTSVEINVAAPMYYKGVYHFFYQHNPHAATFGEKMVWAHSVSYDLINWIHLDHAIEPSEQFDFNGCWSGSATIIPGKEKPVILYTGIDDKKHQVQNIAMPKNPSDPFLREWVKHPQNPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKVVLYHSEDFANWTVELKPFFASDNTGICECPDFFPVSINSTNGVDTSVQNQSVRHVLKISYLRVHQDYYFLGKYANDDGNFIPDVKFTGTSLDLRLDYGKFYASKSFFDHAKSRRILWGWVDECDTSHDDIEKGWAGLQCIPRQVWLDESGNRLMQWPIEEIKTLRDKHISIVGEKLVGGSIIEISGITASQADVEVLFELPELENAEWLEEREVDPRLLCSEEYASRSGIIGPFGLLALASEDQTELTAIFFRIYKTSNRYVCFMCSDQSRSSLRQDLDKTTEGTIFDIDPNQKTISLRSLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGRQSVVISELNAWSMKHAEFGQEESIHKQ* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00476 527 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 328 513 - -
Phac1g00476 527 SUPERFAMILY Concanavalin A-like lectins/glucanases 316 515 IPR013320 -
Phac1g00476 527 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 10 517 - -
Phac1g00476 527 SUPERFAMILY Arabinanase/levansucrase/invertase 10 317 IPR023296 -
Phac1g00476 527 Gene3D - 329 513 - -
Phac1g00476 527 Pfam Glycosyl hydrolases family 32 C terminal 319 512 IPR013189 -
Phac1g00476 527 Pfam Glycosyl hydrolases family 32 N-terminal domain 10 316 IPR013148 -
Phac1g00476 527 Coils Coil 521 527 - -
Phac1g00476 527 CDD GH32_Fruct1-like 10 305 - -
Phac1g00476 527 SMART glyco_32 10 473 IPR001362 GO:0004553|GO:0005975
Phac1g00476 527 Gene3D Glycosyl hydrolase domain; family 43 7 328 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00476 Phac-Chr1 3378644 3381581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00476 10 518 Glycoside Hydrolase AT1G55120 53.565 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00476 - K01193 gmx:100806220 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00476 1 3378644 3381581 Phac1g00476 1 3378644 3381581 ECH