Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00410 ATGGTGGATCCGTACGTTCTCGGCTGGATTCTGTGCTCCGTTCTGACTCTCTTCGCGCTCTACAGCCTCGCCTTCAGCGGAGAGAGCCGGCGTCGAGCTTCGCCGAAGGCGGAGAAGAGCATCGAGCTTTCGGAAACCGTGACCACCTCCACGAGTGAATGCAGATCGGAGAAACGCGACACCGACGTTGACGTCATTATTGTCGGAGCCGGTGTAGCCGGCGCAGCTCTAGCGCACACTCTCGGAAAGGATGGGCGTCGAGTACACGTCATTGAAAGAGATCTGAGTGAGCCTGATCGTATTGTTGGAGAGTTGCTACAACCAGGTGGCTATCTCAAATTGATTGAGCTGGGTCTTGAAGATTGTGTAGACAAAATTGATGCTCAGCAAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACATACTCGTCTCTCTTACCCCTTGGAGAAGTTTCACTCAGATATCTCTGGCAGGAGCTTTCACAATGGTCGCTTTATTCAGAGGATGCGGGAAAAGGCTTCCACCCTTCCCAATGTGCGATTAGAGCAAGGAACAGTCACTTCCCTTGTTGAAGAGAAGGGGACAATTAAAGGCGTGCAATATAAGAACAAAGATGGCCAGGAATTGACAACATTTGCACCTCTTACCATTGTTTGTGATGGCTGCTTCTCAAACTTACGCCGTTCTCTTTGTAATCCTAAGGTTGATGTTCCCTCATGTTTTGTTGGTTTACTTTTGGAGAACTGTGAGCTTCCATGTGCAAATCATGGCCACGTTATACTGGGAGACCCTTCACCAATTCTATTCTATCGTATAAGTAGTACAGAGATTCGCTGTCTGGTCGATGTACCTGGTAAGAAGGTTCCTTCTATTTCAAACGGTGAAATGGAAAAGTATCTGAAGACAACAGTAGCTCCCCAGATTCCCCCAGAACTTTATGATGGCTTCATAGCTGCTGTGGACAAGGGCAACATAAGGACAATGCCAAACAGAAGCATGCCGGCAGATCCTCTTCCTACACCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGGCATCCACTAACTGGAGGCGGAATGACTGTGGCATTGTCTGATATTGTGGTGCTGAGAAATCTTCTAAGGCCCTTGCCTGATCTGAATGATGCACCCACACTCTGCAAGTACCTCGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACAATAAATACATTGGCAGGTGCTCTTTACAAAGTTTTTTGTGCATCCCCTGATCAGGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTAAGCCTTGGAGGCCTATTCTCCGAAGGACCAGTTTCTTTACTTTCTGGATTAAACCCTCGTCCCTTGAGTTTGGTTCTCCATTTCTTTGCTGTTGCAATATATGGTGTTGGCCGTTTATTGTTACCGTTTCCTTCACCTAAGAGAGTATGGATTGGGGCCCGACTAATCTCTGGTGCTTCTGGAATCATCTTCCCCATAATCAAGGCAGAAGGCATTCGTCAAATGTTTTTCCCTGCGACTGTTCCAGCTTATTACAGAACTCCCCCGGTTGGACAATAG 1587 0.4751 MVDPYVLGWILCSVLTLFALYSLAFSGESRRRASPKAEKSIELSETVTTSTSECRSEKRDTDVDVIIVGAGVAGAALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDKIDAQQVFGYALFKDGKHTRLSYPLEKFHSDISGRSFHNGRFIQRMREKASTLPNVRLEQGTVTSLVEEKGTIKGVQYKNKDGQELTTFAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLLLENCELPCANHGHVILGDPSPILFYRISSTEIRCLVDVPGKKVPSISNGEMEKYLKTTVAPQIPPELYDGFIAAVDKGNIRTMPNRSMPADPLPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLPDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRVWIGARLISGASGIIFPIIKAEGIRQMFFPATVPAYYRTPPVGQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00410 528 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Phac1g00410 528 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016020|GO:0050660
Phac1g00410 528 FunFam Squalene monooxygenase 2 57 437 - -
Phac1g00410 528 PANTHER SQUALENE MONOOXYGENASE 12 525 IPR040125 GO:0004506|GO:0016126
Phac1g00410 528 SUPERFAMILY FAD/NAD(P)-binding domain 62 437 IPR036188 -
Phac1g00410 528 Gene3D - 55 436 IPR036188 -
Phac1g00410 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Phac1g00410 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Phac1g00410 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Phac1g00410 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00410 Phac-Chr1 2822869 2829284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00410 45 528 Miscellaneous Gene Families AT1G58440 79.877 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00410 K00511 - gmx:100804406 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00410 1 2822869 2829284 Phac1g00410 1 2822869 2829284 ECH