Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01589 ATGGAGAAGGGGTTAATCTCCGTAGACCGTTGGGCAAAAGGAAGCGAAGCTTACTTCCTCTCCCACCTCCATTCCGACCACACCAACGGCCTCACCTCCTCGTGGTCTCACGCGCCCCTCTTCTGCTCCCCCCTCACCGCCAAACTCCTCCCCTTCAAGTTCCACGACTTCGATCTCTCCCTCCTCCGCATCCTCCACCCCAACGCCTCCCACACTCTCACCCTCAAATCCACCGTTATCCACGTCACCGCCATCGACGCCTGTCACTGCCCCGGTTCCATCATGCTCCTCTTCCGCGGCGACTTCGGCTGCGTCCTCTACACAGGCGACTTCAGGTGGGAAGCCACGTGCCAGAGAGCAACCAACGCCCGCCACTTGCTTCGCAACGCTCTCCACAACGTTCCTGTGGTTGACGTCGTTTACCTCGACAACACCTACTCCAATCCTATCTATGATTTTCCGCCTCGCCATGTGGCGGCTCAGAAGGTTATAGATATAATTTCTTCGCATCCCGATCATGAGGTCATTATCGGGATTAACACTTTGGGGAAGGAAGATCTTCTGATCGAAATTGCGCGCGCGCTTCAAATCAAGATTTGGGTGTGGCCAGAGCGGTTGCGGACTATGCATCTTCTTGGTTTCTATGATATTTTTACAACGGACACGTCTCTTACTAGAGTTAGAGCTGTTCCTCAATATAGCTTTAGTATTGGAGCTCTAGAGTCACTGAATAGAATGTGCCCAACTATTGGGATCTTGCCATCGGGTCTTCCGTGGATTAAGAAATCCCTTCAAAAGAATGAGTTTCTTTCTGGTTCCTTTTTGACACGTCGTTATAAGAGAGGCAAATGGAGTGCAAATAGCGAGGCCGAGAGTGATGACCAAATTAGAAACATAGGATCACCCGAGAAAATTCACGAGTACATGTACACAGTTCCCTACTCTGATCACTCCAATTATGAGGAGATTGAAGAGTTTCTAAAGCTTGTTCAACCAACCAGACTCAAGGGCATTGTGGCTTCCTCGTCATGCTATATTGAACCCATGTACTACTTTGGTCGACTTTGTCGTGTCGACCAACAGACACAAAAGTTGCATGAGGAGCAGAGAAGGAAAGAAAGTTGTAAAAGAGAAATAGAAGCAGTCAGATCCAAAACTTCATTTGGAGGTGATAATGTTCAGACAGGTAGAGACAGAATCAAGGCTTTGAAGGGTAGGTCTTCTGGTGTTCGTCTGAGAAGGTTTAGTAGATTGAGAAGAACGCACCGTGGTGCAAAAATTCAGGGAGATAACTGTTCTGATCAAGAATGA 1311 0.4859 MEKGLISVDRWAKGSEAYFLSHLHSDHTNGLTSSWSHAPLFCSPLTAKLLPFKFHDFDLSLLRILHPNASHTLTLKSTVIHVTAIDACHCPGSIMLLFRGDFGCVLYTGDFRWEATCQRATNARHLLRNALHNVPVVDVVYLDNTYSNPIYDFPPRHVAAQKVIDIISSHPDHEVIIGINTLGKEDLLIEIARALQIKIWVWPERLRTMHLLGFYDIFTTDTSLTRVRAVPQYSFSIGALESLNRMCPTIGILPSGLPWIKKSLQKNEFLSGSFLTRRYKRGKWSANSEAESDDQIRNIGSPEKIHEYMYTVPYSDHSNYEEIEEFLKLVQPTRLKGIVASSSCYIEPMYYFGRLCRVDQQTQKLHEEQRRKESCKREIEAVRSKTSFGGDNVQTGRDRIKALKGRSSGVRLRRFSRLRRTHRGAKIQGDNCSDQE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01589 436 Coils Coil 358 385 - -
Phac11g01589 436 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 377 - -
Phac11g01589 436 Gene3D - 5 337 IPR036866 -
Phac11g01589 436 FunFam Interstrand crosslink repair protein 3 175 - -
Phac11g01589 436 Gene3D - 152 317 - -
Phac11g01589 436 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 335 IPR036866 -
Phac11g01589 436 Pfam DNA repair metallo-beta-lactamase 218 334 IPR011084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01589 Phac-Chr11 14404179 14406912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01589 K15341 - gmx:100775842 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01589 11 14404179 14406912 Phac11g01589 11 14404179 14406912 ECH