Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01510 ATGGCAGAACCTAAGGTTAAGTACGATCGCCAACTCAGAATATGGGGTGACCAAGGACAAGCAGCCCTGGAGAAATCTAGTATTTGCTTACTTAACTGTGGTCCAACCGGTTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATTGGAAGCATCACTGTAGTTGATGGATCTAAAGTCGAAGAGGGTGACCTTGGAAACAATTTTTTGGTGGACGAGGCAAGCCTCGGAAAGTCAAAGGCAAAATGTGTTTGCTCATTTCTTCAAGAGCTGAATGATGCAGTTAAAGCTAAGTTTGTAGAAGAGTCTCCTGAAACATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCTACTCAGCTCGTGGAATATTCAATGATTAAGCTTGACCGAATCTGCAGGGAGGCAAATGTTATTTTGATCTTTGCTCGCTCCTATGGCCTTACAGGGTTTTTTCGAATTAGTGTGAAGGAACATGATGTGATTGAGTCAAAGCCTGAACATTTCTTGGATGATCTCCGTTTAAATAACCCTTGGCCTGAACTCAAGAGATTTGCAGATGACATTGATTTGAATGTTCAAGATCCTGTGGTCCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCGACCAGAGAAGAAAAGAAGGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAGGCTATTGATTCATCATTCAAAGTATTTGCTCTCCGAGGAATAAGTACGGAGTTGCAACAGATACTAAATGATAGTTCTGCTGAAGTGGATTCTAATTCGTCAGATTTTTGGGTATTGGTGGCAGCTCTGAAGGATTTCATTACAAATGAAGGTGGCGGGGAGACACCTCTTGAAGGATCTATACCAGATATGACTTCTTCCACTGAGCAATATGTGAAATTGCAGAATATCTATCACGCTAAAGCTGAGGCTGATTTTCTTGCAATAGAACATCTAGTGAGAAGTACATTGAAGAAGATTGGTAGAGACCCAAATAGCATTCCAAGGTCAACGATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGGTACCGTCTAATTGAAGATGAGTTTAATGCTCCAAACCTACCTGATTTACAGAAGTACTTAACTGATGAGGATTCCAGCATTGCCATGGGAATTTATATTTTGCTTCGTGCTGCTGACCGATTTGCTGCCAATTACAACAGTTTTCCTGGACAATTTGACAGTGCCATGGATGAGGATATACCTCGATTAAAGAGCACAGCAATTAGCTTACTTAACGACTTGGGATGTAATGGTGCCACTTTGGCTGAGGACCTTATCAACGAGATGTGTCGCTTTGGTGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCGTCGCAAGAAGTGATCAAGGTGTGGAAGGTTGTTAAATAA 1509 0.4129 MAEPKVKYDRQLRIWGDQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEEGDLGNNFLVDEASLGKSKAKCVCSFLQELNDAVKAKFVEESPETLIETNPSFFSQFTLVVATQLVEYSMIKLDRICREANVILIFARSYGLTGFFRISVKEHDVIESKPEHFLDDLRLNNPWPELKRFADDIDLNVQDPVVHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIDSSFKVFALRGISTELQQILNDSSAEVDSNSSDFWVLVAALKDFITNEGGGETPLEGSIPDMTSSTEQYVKLQNIYHAKAEADFLAIEHLVRSTLKKIGRDPNSIPRSTIKSFCKNARKLKVCRYRLIEDEFNAPNLPDLQKYLTDEDSSIAMGIYILLRAADRFAANYNSFPGQFDSAMDEDIPRLKSTAISLLNDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKVWKVVK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01510 502 CDD APPBP1_RUB 7 387 - -
Phac11g01510 502 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 497 IPR045886 -
Phac11g01510 502 FunFam NEDD8-activating enzyme E1 regulatory subunit 1 274 - -
Phac11g01510 502 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 497 IPR035985 GO:0008641
Phac11g01510 502 Gene3D - 351 499 - -
Phac11g01510 502 Gene3D - 2 277 - -
Phac11g01510 502 FunFam NEDD8-activating enzyme E1 regulatory subunit 361 500 - -
Phac11g01510 502 PIRSF APP-BP1 1 499 IPR030667 GO:0019781|GO:0045116
Phac11g01510 502 Pfam ThiF family 8 497 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01510 Phac-Chr11 12805501 12812410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01510 7 78 EF-hand Containing Proteins AT2G30110 32.468 2.51e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01510 K04532 - gmx:100793799 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01510 11 12805501 12812410 Phac11g01510 11 12805501 12812410 ECH