Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01417 ATGGGAAGTATTTCAGGAGTCTCCTCTGCAGTTGCCAGAAGATTAGAAGGGAAGGTGGCGTTGATCACAGGGGGAGCAAGTGGCATAGGGGAGTGCACGGCGAGACTGTTTGCCAAGCATGGAGCCAAAGTAGTGATCGCTGATGTCCAAGACGAGTTAGGTCACTCAGTTTGCAAGGACATAGACTCCTCCTTCTACGTCCACTGCGACGTCACAAAAGAGGAACACGTGGAACGTGCCGTGAACACTGCTGTTTCTAGGTTCGGGAAACTAGACATCATGCACAACAACGCAGGAATCATCGGGGTGTGGAACCCCAACATTATTCACAACAAGAAATCCGATTTCGAGGAAGTGATTAGCACAAACTTGGTCGGTGTGTTCCTGGGAATGAAGCATGCGGCGAGGGTAATGGCCCCTTCTCGACGCGGCAGCATAATCGCAACCGCAAGCACGTGTGGACGCATAGGTGGCATGGCTTCGCACGCTTACACGTGCTCCAAGCATGGCGTTGTGGGGCTCGTGCGAAACGCTGCAGTGGAGCTTGGACCCTTGGGGATACGAGTGAATTGTGTGTCTCCATACGCGGTTCCTACGCCGATGAGTAAGAGTTTTCTGAACACTGATGATGAAGGGATTGCTGCACTTTATTCCAATCTGAAAGGTGTTACTCTTAAGCCCCAAGATATAGCTGAAGCTGTGGTTTACTTGGGGAGTGATGAGTCCAAGTATGTTAGTGGGCATGACCTTGTTGTGGATGGAGGCTTCACTGTAGTCAATGCTGGTATGTGTGCATTTGGGCAGTAG 807 0.5105 MGSISGVSSAVARRLEGKVALITGGASGIGECTARLFAKHGAKVVIADVQDELGHSVCKDIDSSFYVHCDVTKEEHVERAVNTAVSRFGKLDIMHNNAGIIGVWNPNIIHNKKSDFEEVISTNLVGVFLGMKHAARVMAPSRRGSIIATASTCGRIGGMASHAYTCSKHGVVGLVRNAAVELGPLGIRVNCVSPYAVPTPMSKSFLNTDDEGIAALYSNLKGVTLKPQDIAEAVVYLGSDESKYVSGHDLVVDGGFTVVNAGMCAFGQ* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01417 268 Pfam Enoyl-(Acyl carrier protein) reductase 24 257 - -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 138 154 IPR002347 -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 220 240 IPR002347 -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 164 183 IPR002347 -
Phac11g01417 268 PRINTS Glucose/ribitol dehydrogenase family signature 185 202 IPR002347 -
Phac11g01417 268 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 151 179 IPR020904 GO:0016491
Phac11g01417 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 IPR002347 -
Phac11g01417 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 IPR002347 -
Phac11g01417 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 IPR002347 -
Phac11g01417 268 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 12 260 - -
Phac11g01417 268 FunFam Short-chain dehydrogenase reductase 3 262 - -
Phac11g01417 268 Gene3D - 5 265 - -
Phac11g01417 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 259 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01417 Phac-Chr11 11092896 11094130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01417 11 258 Acyl Lipid Metabolism Gene Families AT1G24360 30.315 5.59e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01417 - - gmx:100810754 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01417 11 11092896 11094130 Phac11g01417 11 11092896 11094130 ECH