Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01149 ATGAAACAAGCAACCCTTTTCTCCTTCTCACTCTTTCTACTATTTTCCTCTACCACCTTGGCTATTTCACCTGCACCTGCAGCAGCCCCAAAAGCCCCTGCAGCAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCCCCTGACTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTAGTCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAACTCATAACAGCCAAGAGTGGGGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAACTCCCTAAACGCAGGCCAGAAAATTGAACTTGTGCAGTTCCACATATTACCAGAGTTTGTGTCCAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACCGTGGCTGGTAAAGACCCTGCAAGGCTTCCACTGAATGTGAATGCATTAGGTAACAGCGTCAACATTTCAACTGGGGTCGTCAATGCCACCATTCTTGGGGTAGTATACTCGGATAACAAACTTGGAATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAATAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCTGCTAAGGAAAACTCTTCTGATGACGATCAAGAAGAAGCAAACCAGGATTACAATAAATCTGGGGCACTCAGTTTGAGCAGCGTTAGTGGAACAAAGTTGATGTCACTTGGGATAGCCTTGGTCGCTATGGCAACCATCCTACTCCTTCATGCCATCAACTCATCAACTGCACACTGCAATTACAATTCCTATCATTTCCAATATCATCCAAACCTTCATTTAACCAAAATGATGAAAAAGCAACGTGTCTTGTCCTTCTCACTAGCAGTGCTACTTTCATCTTTGTTTTTCACCATCACTTTAGCCCAGTTAGCACCAACTGCTTCCCCTCTAAAGCCACCCCAACCTATCCCTACACCACCAGCTGCAGCCCCTAAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACCCCTGACACTGCAGCTGTTGACATTGTTGGTATCCTGAGGCAGGCTAAGTCATTCAACATCCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTTGCACCTGATGACAGTTCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCTGACTATGTGTCTAGCTCCAACTTCGATACTCTAACCAACCCAGTGAGAACCCTTGCAGGGGCTAAACCTGGAAAAGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACAGGCATTGTATATACGGATAAGCATCTTGCTATTTATAAGGTGGGAAAGGTTCTTCTTCCTATGGACTTCTTTGCTGTTGCCAAAGCACCTGCAAAGGCACCCTCTTTGGCACCAGAACCATCTGCAAGGTCTCCTAAAGCAGATAAGGAGCCATTATCCCCAGATACCTCAGAATCATCTCAGACTAATCCCACAAACGATAACTCTGGCACTGAGAAAATCCATATGAATGGAAAGTGGGTGTCCCTTGTTCTTGGACTAGTTGTAGTGACTGCATTGTCTTCTTAA 1806 0.4601 MKQATLFSFSLFLLFSSTTLAISPAPAAAPKAPAAKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLVRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNAGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPSSLAKAPKAAKENSSDDDQEEANQDYNKSGALSLSSVSGTKLMSLGIALVAMATILLLHAINSSTAHCNYNSYHFQYHPNLHLTKMMKKQRVLSFSLAVLLSSLFFTITLAQLAPTASPLKPPQPIPTPPAAAPKPLVPSLPQSPSDSTPDTAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSARSPKADKEPLSPDTSESSQTNPTNDNSGTEKIHMNGKWVSLVLGLVVVTALSS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01149 601 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Phac11g01149 601 SUPERFAMILY FAS1 domain 375 527 IPR036378 -
Phac11g01149 601 MobiDBLite consensus disorder prediction 560 579 - -
Phac11g01149 601 MobiDBLite consensus disorder prediction 346 369 - -
Phac11g01149 601 Pfam Fasciclin domain 78 212 IPR000782 -
Phac11g01149 601 Pfam Fasciclin domain 392 526 IPR000782 -
Phac11g01149 601 MobiDBLite consensus disorder prediction 346 376 - -
Phac11g01149 601 MobiDBLite consensus disorder prediction 29 67 - -
Phac11g01149 601 MobiDBLite consensus disorder prediction 43 60 - -
Phac11g01149 601 MobiDBLite consensus disorder prediction 540 579 - -
Phac11g01149 601 SUPERFAMILY FAS1 domain 49 213 IPR036378 -
Phac11g01149 601 Gene3D FAS1 domain 54 212 IPR036378 -
Phac11g01149 601 Gene3D FAS1 domain 366 526 IPR036378 -
Phac11g01149 601 MobiDBLite consensus disorder prediction 236 250 - -
Phac11g01149 601 ProSiteProfiles FAS1/BIgH3 domain profile. 380 524 IPR000782 -
Phac11g01149 601 SMART fasc_3 108 213 IPR000782 -
Phac11g01149 601 SMART fasc_3 422 527 IPR000782 -
Phac11g01149 601 FunFam Fasciclin-like arabinogalactan protein 11 54 212 - -
Phac11g01149 601 MobiDBLite consensus disorder prediction 228 250 - -
Phac11g01149 601 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 318 580 IPR045003 -
Phac11g01149 601 FunFam Fasciclin-like arabinogalactan protein 11 366 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01149 Phac-Chr11 7716613 7720091 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01149 - - gmx:100792674 460.299