Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01051 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGGGCTGGTCGATCTTTTGCGACATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCTGGTTCACTAACGTCGAGAAATTCAACTATAAATAATGTACCATCAGGCGGCGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTACCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGGTGCAATTGGTAACCGAAATGCTGTTCCAGGGTTGGGAGTGTCCCCGATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCTGTGGGAAACATGGTTGGTGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCCAGTGGTTTAGGCATGCAAGGACAGAATCGATTAATGAGTGGTGTGCTCCCACAAGGGTCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCCAGCGCTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTAAGTAACTTGAACTCTATGGGAATGTTGAATGATGTGAATACCAATGACAGTTCCCCTTTTGACCTCAACGACTTCCCTCAACTGACAACTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTCAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGCGGTAATGCAGATTATGCTATGGATATTCACCAGAAAGAACAACTTCATGACAATGCTGTACCAATGATGCAATCTCAACATTTCTCTATGGGAAGGTCGGCTGGTTTCAGCTTAGGGGGTACATATTCGTCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACCAAGATATTCTCCATTTGCATGGATCAGATATTTTCCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCATCAAAACCAGTCGCAGTTCCGCCTACAAATGTCAGCTGTAAATCAATCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACCACACAACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTTACATCTCTTGCTCTTGGAATTGATCTTACCACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGTTCTCCATGGTCTGATGAACCTGCTAAGGGCGATCCAGAGTTTAATGTGCCACAATGTTATTATGCTAAACAGCCACCCGATCTACATCAAGGATACTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATATGCCTCCAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTTCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAACAGACCCCATCTGCCTCAACATTGA 1977 0.4299 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSGAIGNRNAVPGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDLNDFPQLTTRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDIHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNQDILHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPDLHQGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHKEHRLWFIRVSNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLENRPHLPQH* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01051 658 MobiDBLite consensus disorder prediction 59 90 - -
Phac11g01051 658 MobiDBLite consensus disorder prediction 370 392 - -
Phac11g01051 658 PANTHER CCR4 NOT-RELATED 48 652 IPR040168 GO:0030015
Phac11g01051 658 Pfam NOT2 / NOT3 / NOT5 family 527 649 IPR007282 GO:0006355
Phac11g01051 658 Gene3D - 477 658 IPR038635 -
Phac11g01051 658 MobiDBLite consensus disorder prediction 413 441 - -
Phac11g01051 658 FunFam probable NOT transcription complex subunit VIP2 isoform X1 476 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01051 Phac-Chr11 6879306 6890035 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01051 K12605 - gmx:100807026 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01051 11 6879306 6890035 Phac11g01051 11 6879306 6890035 ECH