Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01042 ATGGAGTTCCTCTATCTACTCTACCTCGTCCCAACGTTGTACTCATGTTTTCTCATCTGGAAAATGTTGGAGGAGAGACGCGACAGGGAGTGTTACATCCTGGACTACCAATGCTACAAGCCCCCCAACGACCGAATGCTGGGCACTGAGTTCTGTGGGAAACTCATCAAACGCACCGAAAATTTGGGTCCCAGCGAGTACCGTTTTCTGCTCAAGGCCATCGTCAGCTCCGGCATCGGCGAACAAACTTATGCGCCAAGAAACATCTTCGAGGGTCGCGAGGGAACGCCCACATTGTTCGACGGCATCGAAGAGATGGAAGAGTTCTTCAACGACGCCATCGCCAAGCTCCTCGCTAAATCAAAAGTCTCCCCCTCCGAGATCGACATCCTCGTCGTCAACATCTCCATGCTCGCCGCCGTCCCCTCCCTCTCGTCTCGAATAATCAACCGCTACAAGCTCCGCCATGACGTCAAGGTCTACAACCTCACCGGCATGGGTTGCAGCGCCAGCCTGATCTCCATGGACATTGTCAAAAGCATCTTCAAGACGCAGAGGAACAAGCTGGCGTTGTTGATCACCTCCGAGTCCCTCAGCCCCAACTGGTACACCGGCAACGACAGATCCATGATCCTCGCCAACTGCTTGTTCCGCTCCGGCGGCTGCGCGATTCTCTTGACCAACAAACGGTCTATGAAGGACAGAGCCATGCTGCGGTTGAAGTGCCTGGTGAGGACGCATCACGGTGCCAGAGAAGAGGCTTACGGTTGCTGTGTTCAGCGGGAAGACGAGCAGGGAAGGCTAGGGTTTCACCTTGGGAAGACGCTTCCCAAGGCCGCAACCCGAGCCTTCGTTGACAATCTTCGAGTCATAGCACCCAAGATATTACCTGTCCGTGAGTTGCTGAGGTTTTTGTTCATGTCGCTGATTAAAAAAGTGAACAAAAACAACAGTCCTAAGTCTGCGATCACCGGAGCTACTAAATCTCCGTTGAACTTCAGAACAGGGGTGGACCATTTTTGCTTGCATACCGGAGGAAAAGCTGTGATCGACGGCATTGGAATGAGCTTGGATCTGAGCGAGTACGACCTGGAACCGGCTAGGATGACGCTGCACCGTTTCGGGAACACGTCAGCCAGTAGCTTGTGGTACGTGTTATCGTACATGGAAGCGAAGAAGAGGTTGAAGAAGGGTGACACGGTGTTCATGATAAGCTTTGGTGCAGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTGATGAAGGACCTGGGAGACCCAAATGTGTGGGACGACTGCATTGATGACTACCCACCGGAGTCATTGGAGAACCCCTTCATGAAGACCTACGGTTGGATCAACGAGGTTGAGGACCCCTACACTTACGAAAATATCCCTGATTTTCTCAAGTGA 1410 0.5241 MEFLYLLYLVPTLYSCFLIWKMLEERRDRECYILDYQCYKPPNDRMLGTEFCGKLIKRTENLGPSEYRFLLKAIVSSGIGEQTYAPRNIFEGREGTPTLFDGIEEMEEFFNDAIAKLLAKSKVSPSEIDILVVNISMLAAVPSLSSRIINRYKLRHDVKVYNLTGMGCSASLISMDIVKSIFKTQRNKLALLITSESLSPNWYTGNDRSMILANCLFRSGGCAILLTNKRSMKDRAMLRLKCLVRTHHGAREEAYGCCVQREDEQGRLGFHLGKTLPKAATRAFVDNLRVIAPKILPVRELLRFLFMSLIKKVNKNNSPKSAITGATKSPLNFRTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDPNVWDDCIDDYPPESLENPFMKTYGWINEVEDPYTYENIPDFLK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01042 469 PANTHER 3-KETOACYL-COA SYNTHASE 17 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phac11g01042 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Phac11g01042 469 SUPERFAMILY Thiolase-like 18 232 IPR016039 GO:0016746
Phac11g01042 469 Gene3D - 75 419 IPR016039 GO:0016746
Phac11g01042 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phac11g01042 469 CDD CHS_like 19 417 - -
Phac11g01042 469 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phac11g01042 469 SUPERFAMILY Thiolase-like 243 419 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01042 Phac-Chr11 6825033 6827030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01042 19 466 Acyl Lipid Metabolism Gene Families AT2G28630 69.147 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01042 K15397 - gmx:100810048 880.167