Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00997 ATGGCATCTCAGGCCAGCCTTCTCCTTCAAAAGCAGCTCAAAGATCTTTGCAAAAACCCCGTCGACGGCTTCTCCGCCGGTTTGGTGGACGAAATCAACATTTTTGAATGGAGTGTCACCATAATTGGACCGCCAGATACTCTATATGAGGGGGGCTTTTTCAATGCTATTATGAGTTTTCCATCCAATTATCCAAATAGTCCACCTTCAGTGAAGTTTTCCTCAGAGATATGGCATCCCAATGTATATCCTGATGGTCGGGTTTGCATATCGATTCTTCATCCTCCTGGTGAGGATCCAAATGGTTATGAGCTTGCAAGTGAACGTTGGACACCTGTTCATACAGTAGAGAGTATAGTGTTGAGTATCATATCAATGCTTTCCAGCCCTAATGATGAATCTCCTGCAAATGTTGAAGCTGCAAAGGAGTGGAGAGATAGGAGAGATGATTTCAAGAAAAAGGTGAGCCGATGTGTAAGGAAGTCACAAGAAATGTTGTGA 501 0.4351 MASQASLLLQKQLKDLCKNPVDGFSAGLVDEINIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFSSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEML* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00997 166 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 163 - -
Phac11g00997 166 CDD UBCc 17 159 IPR000608 -
Phac11g00997 166 SMART ubc_7 7 164 - -
Phac11g00997 166 FunFam ubiquitin-conjugating enzyme E2 7 2 166 - -
Phac11g00997 166 SUPERFAMILY UBC-like 3 162 IPR016135 -
Phac11g00997 166 Gene3D Ubiquitin Conjugating Enzyme 2 166 IPR016135 -
Phac11g00997 166 Pfam Ubiquitin-conjugating enzyme 9 158 IPR000608 -
Phac11g00997 166 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Phac11g00997 166 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 4 164 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00997 Phac-Chr11 6492993 6498056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00997 11 131 Miscellaneous Gene Families AT3G17000 31.538 1.43e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00997 K10575 - gmx:100305813 311.997