Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00996 ATGGCTTCTTCATTGTTTCTATGCACATTCTTCATCCTCGCTGTCACCACCCTTACCTCACCCACAGCTGCACTTATCTTAACCCTTGTTAACAACTGCAACTACACCGTCTGGCCAGCCATTCAACCCAACGCCGGCCACCCAGTCCTCGCCGGCGGTGGCTTCACCCTCCACACCCTCACCCACCTCTCCATCCCCGTCCCCGACGTCCACTGGTCGGGCCGGGTCTGGGCCCGTACCGGCTGCACCTACTCCGGCACCGCCTTTTCCTGCGCCAGCGGAGACTGCGGCGGCCGTCTCCAGTGCAACGGTGCTGGTGGCGCCGCCCCCGCCTCCTTGGCGCAGGTGGAGGCCCACCACGGCAACGGCGACTACGTCTCCTACAGCGTGAGCCTCGTGGACGGCTTTAACGTCCCTATGACCGTGACCCCGCACGAGGGCAAAGGCGTGTGCCCGGTGGTTGGTTGCCGCGCCGACTTGCTGGCCACGTGTCCCTCCGTGCTGCAGCACCGTGTCCCCGCCGTTCATGGACCCGTCGTCGCGTGCAAGAGCGGGTGCGAGGCTTTTCACACCGACGAGCTCTGCTGTAGGAACCACTTCAACAGCCCCCACACGTGCCGTGAGTCCGTGTACTCCACCTTCTTCAAGCACGCGTGCCCCAACACGTTCACCTACGCGCACGACAACCCCTCTCTCATGCACCAGTGTTCCTCCCCGCATGAACTTAAGGTCATCTTTTGCCACTGA 747 0.6305 MASSLFLCTFFILAVTTLTSPTAALILTLVNNCNYTVWPAIQPNAGHPVLAGGGFTLHTLTHLSIPVPDVHWSGRVWARTGCTYSGTAFSCASGDCGGRLQCNGAGGAAPASLAQVEAHHGNGDYVSYSVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPSVLQHRVPAVHGPVVACKSGCEAFHTDELCCRNHFNSPHTCRESVYSTFFKHACPNTFTYAHDNPSLMHQCSSPHELKVIFCH* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00996 248 CDD TLP-PA 26 247 - -
Phac11g00996 248 Pfam Thaumatin family 31 247 IPR001938 -
Phac11g00996 248 PIRSF PR5 1 248 IPR001938 -
Phac11g00996 248 PANTHER OS03G0233200 PROTEIN 12 247 IPR001938 -
Phac11g00996 248 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
Phac11g00996 248 FunFam Osmotin-like protein 26 247 - -
Phac11g00996 248 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Phac11g00996 248 Gene3D Thaumatin 26 247 IPR037176 -
Phac11g00996 248 SMART tha2 27 248 IPR001938 -
Phac11g00996 248 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Phac11g00996 248 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Phac11g00996 248 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Phac11g00996 248 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00996 Phac-Chr11 6488375 6490186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00996 1 247 Receptor kinase-like Gene Family AT5G38280 35.714 2.37e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00996 - - gmx:100818233 471.085