Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00950 ATGCAGCTAATTGTGATTAATATTTCCAAACTCACTCACTCAGGCCTAAAACACTATATTGGTGCAAGCAGAGACAAAATGGTCACAACTGTTCCTTCGTCACCAACACTTTTTGTGGCGTTCCTCTTTGTCACAAGCTTCCTTGTTCTCGCCACTAGTTCAAAGCATGGAAGCGTTACAAGGCACTACAAGTTTGATATAAGGTTGAGAAATGTTACGAGGCTGTGCCACACAAAGAGCATGGTTACAGTGAACGGAAAGTTCCCTGGTCCTAGAGTTGCTGCAAGAGAAGGTGACAGAATTGTGGTTAAGGTGGTCAATCATGTTCCGAACAATGTCACCATACACTGGCATGGAGTGAGACAGCTTCGAAGTGGATGGGCAGATGGCCCATCTTACATAACTCAGTGTCCCATTCAAACTGGCCAAAGTTATGTGTACAACTTCACCATTGTTGGACAAAGAGGAACCCTCTTCTGGCATGCTCACATCTCATGGTTAAGAGCCACTCTCTATGGACCTCTTATCCTCCTCCCTAGGAGCAATGAATCTTACCCATTTGAAAACCCCTACAAGGAAGTTCCCATTCTCTTTGGTGAGTGGTGGAACGCGGATCCAGAGGCTGTTATTGCACAAGCCCTTCAGTCAGGGGCTGGTCCAAATGTTTCAGATGCCCACACCTTTAACGGATTTCCTGGACCCCTCTACAATTGCTCCAATAACGAGACAGAGACAGAGACGTTCAGGTTAAAGGTGAAACCAGGGAAGACATACCTTCTTCGTTTGATCAATGCTGCACTCAATGACGAGCTCTTTTTCAGCATTGCAAATCACACCCTGGTGATTGTTGAAGCTGATGCTACTTACGTTAAACCTTTTGAGTCCAAGATCATAGTCCTAGGACCGGGACAAACCTCAAATGTTCTGTTGAAGACAAAACCTGAGTACCCAAATGCCACTTTCTTCATGCTAGCAAGGCCATATTTCACTGGCATGGGCACTTTCGACAATTCCACAGTTGCTGGCATTCTAGAGTACAAGAAGCCACTTGCTCCCAAAAACATTCCCACTTTTAAACCCTCCCTTCCAGCAATCAACGACACTTCCTTCGTTGCCAACTTCTCAAGCAAATTTCGCAGTTTGAACACAGCCAAGTACCCTGCCAAGGTACCTCAAAAAGTTGACAAGAGCTTTTTCTTCACGGTTGGTCTTGGAACAAGTCCCTGCCCCAAAAACCAAACATGCCAAGGACCAAACAACAGTTCAAAATTTGCAGCCTCGATGAACAATATATCTTTCACTCTTCCTTCTATAGCACTTCTTCAGCAACATTTCTTTGGGCAGGCTAATAACGGCATTTACACCACTGATTTTCCTGCTGTCCCACTGAGGACATTCAACTACACGGGGACCCCACCTAACAACACAAGGGTCACCAATGGAACCAAGACTGTGGTCATACCCTTTAACACAAACGTGCAAGTGGTGCTTCAGGATACTAGCATTTTAGGAGCTGAGAGCCACCCTTTGCACCTTCATGGCTTTAATTTCTATGTCGTGGGTCAAGGCTTTGGGAACTTTAATCCCATCACTGACCCTCCAAACTTCAATCTGGTTGACCCCGTTGAAAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGGTTGCAATCCGATTTCTTGCTGACAACCCAGGTGTGTGGCTGATGCACTGTCACTTTGATGTGCACCTTAGTTGGGGGTTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTCCCTAATCAGAAGTTGCCTCCTCCACCAGCTGATCTGCCCAAGTGTTGA 1824 0.4622 MQLIVINISKLTHSGLKHYIGASRDKMVTTVPSSPTLFVAFLFVTSFLVLATSSKHGSVTRHYKFDIRLRNVTRLCHTKSMVTVNGKFPGPRVAAREGDRIVVKVVNHVPNNVTIHWHGVRQLRSGWADGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHISWLRATLYGPLILLPRSNESYPFENPYKEVPILFGEWWNADPEAVIAQALQSGAGPNVSDAHTFNGFPGPLYNCSNNETETETFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVIVEADATYVKPFESKIIVLGPGQTSNVLLKTKPEYPNATFFMLARPYFTGMGTFDNSTVAGILEYKKPLAPKNIPTFKPSLPAINDTSFVANFSSKFRSLNTAKYPAKVPQKVDKSFFFTVGLGTSPCPKNQTCQGPNNSSKFAASMNNISFTLPSIALLQQHFFGQANNGIYTTDFPAVPLRTFNYTGTPPNNTRVTNGTKTVVIPFNTNVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNPITDPPNFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPADLPKC* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00950 607 SUPERFAMILY Cupredoxins 188 380 IPR008972 -
Phac11g00950 607 ProSitePatterns Multicopper oxidases signature 1. 565 585 IPR033138 -
Phac11g00950 607 Pfam Multicopper oxidase 193 348 IPR001117 -
Phac11g00950 607 CDD CuRO_3_LCC_plant 453 590 IPR034289 GO:0005507
Phac11g00950 607 NCBIfam laccase 60 607 IPR017761 GO:0046274|GO:0048046|GO:0052716
Phac11g00950 607 Gene3D - 48 178 IPR008972 -
Phac11g00950 607 ProSitePatterns Multicopper oxidases signature 2. 570 581 IPR002355 GO:0005507
Phac11g00950 607 Pfam Multicopper oxidase 70 180 IPR011707 GO:0005507
Phac11g00950 607 SUPERFAMILY Cupredoxins 56 211 IPR008972 -
Phac11g00950 607 CDD CuRO_1_LCC_plant 63 179 IPR034288 GO:0005507
Phac11g00950 607 CDD CuRO_2_LCC_plant 194 346 IPR034285 -
Phac11g00950 607 FunFam Laccase 48 179 - -
Phac11g00950 607 FunFam Laccase 191 384 - -
Phac11g00950 607 PANTHER MULTI-COPPER OXIDASE 53 595 IPR045087 -
Phac11g00950 607 Pfam Multicopper oxidase 469 590 IPR011706 GO:0005507|GO:0016491
Phac11g00950 607 SUPERFAMILY Cupredoxins 387 607 IPR008972 -
Phac11g00950 607 Gene3D - 191 384 IPR008972 -
Phac11g00950 607 Gene3D - 411 607 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00950 Phac-Chr11 6138143 6141782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00950 K05909 - gmx:100811833 1114.37