Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00939 ATGGCTCAACTCGAACGCCCTCAGAGACAGGTTGATACTACAAAAGCTCCACCTACCATCCACACCATGGAACAACTCCTCCGAGGGGAGTCCTCCAAGTCTAGTAGGCAGTCACCAACCTCCCCCTCCTCCAACTTGTCTTCCCCAAACTCCCCTTTCTTCCAAAGGTTGAGGTCTCATGACTCAGAAGACGACCATTCCCAGAATCAGAAGAAATCAGTTCTCACCAAAGTCAAGGAGAAGGCCAAGAAGCTACGCCACAGCCTCAGCAAGAAAAAACATGAGGACGGGAGCCTCAGTAGTCCCTCATCTGCTACTGCCGCAGAAGCTGATGCAGTAGAAGAAGATGCTGAATTTCTCGGAGCTCCTATGTACGAATCAGAGAAGGCACCTATAGGGTACAAAGCAAATGCAAAGCCGCTTATAAGTCCAAGAGCAAATTATGTGATCCCTGAGAAGCATGTTATATCAAGCAGTGACAAACACGTAGTCGAACAAGATCATGAAAAGTCACTAACCCGTTCCTTATCCAAGAGAACAACACAACCAGCAGCAACAATAGCAACAACCACTTCATATGCTACCCCTGCTTCTAATATTAATATTAACACTAAAAGAAATACTAGTACTCCTTCCGGTCCAATCAAGACAACCACTGAAACATTAGCCCCTAAACTGTCAACAGTTCAAGCTGAAAAACCAGATGCCGCCCATGTAACCTCCAAATTTCAAGGTCTTACTGTGTCCAAACCCTCAGAGCTTCATGATCATCCTTCTTCATCATCATCATCACCAACATCAACAGTTGCACCAAACACAATTCGCAACACTTCTTTGTCCTATTCTGCTCCTCGTACTCCCCCTGTAAGAGTAACTTCCCAATTTCCTACAACCACTCCGCGAACTACATCAGCTCCAGTGACTCCAGCACCATCACCTGCTACCCCACTGAGTGCGAAGAGCACAAGCCCCACCGCGCAAATATGGGATAAGGGTGTGTCCATGAAAGAGTACTTGTTGACCAAATTGGAGCCGGGGGAAGATGAGAAGGCGCTGTCTCAGGTGATATCTGAAGCAATGAGTCCTAGGAGAACTCCTGGTGATGCAGGCGTGATGGAGAAGGTGAGAGAAGCTGTCACTTCTTTGCTCCGAACTGAGCAGCCTGCAAAATATGCAGACGAAACTACTGCGGCTACTACTACCAGTACTGCTCGTATGTCACCTCAAAGCCCAGTATCTCCCAACGCTTCTCGCGCTTCTTCTCAAATCCCATCATCTTCCAATGCTTCTCGTGCTTCGTCTCAAATGCCAGCATCTACCGGTGTTTCTCGCACTTTATCTCAAATCCCTGTATCTTACAACGCCCAGCAAGACTATACAGTGGCCCAGGAAGAAAACAATGGCCGAATTCTTCAGCCAAATTGA 1425 0.4737 MAQLERPQRQVDTTKAPPTIHTMEQLLRGESSKSSRQSPTSPSSNLSSPNSPFFQRLRSHDSEDDHSQNQKKSVLTKVKEKAKKLRHSLSKKKHEDGSLSSPSSATAAEADAVEEDAEFLGAPMYESEKAPIGYKANAKPLISPRANYVIPEKHVISSSDKHVVEQDHEKSLTRSLSKRTTQPAATIATTTSYATPASNININTKRNTSTPSGPIKTTTETLAPKLSTVQAEKPDAAHVTSKFQGLTVSKPSELHDHPSSSSSSPTSTVAPNTIRNTSLSYSAPRTPPVRVTSQFPTTTPRTTSAPVTPAPSPATPLSAKSTSPTAQIWDKGVSMKEYLLTKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRTEQPAKYADETTAATTTSTARMSPQSPVSPNASRASSQIPSSSNASRASSQMPASTGVSRTLSQIPVSYNAQQDYTVAQEENNGRILQPN* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00939 474 Coils Coil 75 95 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 242 305 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 157 175 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 57 76 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 157 325 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 1 114 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 382 449 - -
Phac11g00939 474 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 23 472 IPR037491 GO:0009737
Phac11g00939 474 MobiDBLite consensus disorder prediction 392 449 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 1 56 - -
Phac11g00939 474 MobiDBLite consensus disorder prediction 176 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00939 Phac-Chr11 6058968 6061045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00939 - - var:108319604 552.747