Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00936 ATGTGCGGACGAGAAAAGCAACCTATATATCAATTCTACTCAAATAATCAAAAGTTTCTAATTTTAAAATGTATAATAAGCTGGTTTCATGCTCCAATTAATCAGAATTTTATTTCACAATTTAGGTTTCTGTTCCCTGCATTGGGTGGCTTATTATTTGGTTATGATATTGGTGCCACCTCCGGCGCTACAATCTCACTGCAGTCACCCGACCTTAGCGGAATAACATGGTTCAATCTTTCTGCCATTCAGCTTGGACTAGTGGTTAGTGGTTCCCTATACGGGGCTCTTCTTGGTTCACTTCTTGCGTATGGCATAGCTGATTTCCTTGGGAGGAAGCGACAGCTCATTGCTGCAGCACTGTTGTATATATTTGGTGGTGTGGTTACTGCCAATGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCATGGGGCTCCTTTGTATATTGCAGAGACTTGTCCATCACAAATCCGTGGTACCCTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGTTGGGTTATTTTGTAGGAAGCTTTCTGATTGATTCAGTTGGGGGATGGCGGTTCATGTATGGATTTAGTGCTCCAGTTGCTGTATTAATGGGGCTTGGAATGTGGACTCTCCCCCCTTCTCCACGTTGGTTGCTTCTCAGAGCAGTGCAAGGAAAAGGTTCTTTTCAAGATTTGAAAGAAAAGGCCATTGCTTCCCTGAGCAAACTAAGGGGTCGACCACCTGGTGACAAAGAATCTGAGAGGCAAATAGAAGATACCCTTCTCTCATTGAAGTCTGCCTATGGACAAGAGGAATCAGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCCAATCTGAAAGCTTTCATAATTGGTGGAGGACTAGTCTTATTTCAGCAGATAACAGGTCAACCAAGTGTTCTGTATTATGCAGGCCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCATCTGATGCTACAAAAGTTTCAGTTGTTATTGGCTTTTTCAAGTTACTAATGACTTGGATTGCTGTCCTAAAAGTTGATGATTTGGGGAGAAGGCCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCCTCTCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGGTTCCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGTTAATGGTATCAGAGATCTTCCCAATTCGCACTAGAGGAAAGGGGATTAGTCTGGCTGTTCTTACCAACTTTGCTTCAAATGCTGTAGTCACTTTTGCATTCTCTCCATTAAAGGAGCTTCTAGGAGCAGAAAATCTTTTTCTCCTTTTTGGGGCTATTGCTATTCTATCACTTCTGTTCGTTATCTTTTCTGTCCCAGAGACAAAAGGCTTGAGTTTAGAAGATATAGAATCCAAAATCTTGAAATGA 1500 0.422 MCGREKQPIYQFYSNNQKFLILKCIISWFHAPINQNFISQFRFLFPALGGLLFGYDIGATSGATISLQSPDLSGITWFNLSAIQLGLVVSGSLYGALLGSLLAYGIADFLGRKRQLIAAALLYIFGGVVTANAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFLIDSVGGWRFMYGFSAPVAVLMGLGMWTLPPSPRWLLLRAVQGKGSFQDLKEKAIASLSKLRGRPPGDKESERQIEDTLLSLKSAYGQEESEGNFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGFFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEIFPIRTRGKGISLAVLTNFASNAVVTFAFSPLKELLGAENLFLLFGAIAILSLLFVIFSVPETKGLSLEDIESKILK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00936 499 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 40 497 - -
Phac11g00936 499 CDD MFS_GLUT10_12_Class3_like 45 493 - -
Phac11g00936 499 Gene3D MFS general substrate transporter like domains 36 497 IPR036259 -
Phac11g00936 499 PRINTS Sugar transporter signature 311 321 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 PRINTS Sugar transporter signature 398 419 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 PRINTS Sugar transporter signature 50 60 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 PRINTS Sugar transporter signature 421 433 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 486 IPR020846 GO:0022857
Phac11g00936 499 FunFam D-xylose-proton symporter-like 3, chloroplastic 36 497 - -
Phac11g00936 499 SUPERFAMILY MFS general substrate transporter 42 494 IPR036259 -
Phac11g00936 499 NCBIfam sugar porter family MFS transporter 44 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac11g00936 499 Pfam Sugar (and other) transporter 45 494 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00936 Phac-Chr11 6054288 6058416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00936 43 499 Organic Solute Cotransporters AT5G59250 82.495 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00936 - - gmx:100809316 806.594