Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00933 ATGCATCAGCTTTCCCTCATAAATCCAACTTCGTATCTTCCATTGCCGTCAAACCGCACTACCACCACCACCTCTTTCATTTTCAATCATGTAAGAAAAATATCAAAGTCCAATTGCATTCGGAGCCAGTCCACGCAGCAAAGGTGGACTCTTCAGGGCATGACAGCTCTCGTCACTGGTGGAACTCGCGGAATAGGGCGCGCCATTGTTGAGGAATTGACGGGGTTTGGAGCCAGAGTTCATACCTGTGCCAGGAACGAACACGATCTCACTGAATGCCTGAAGAAATGGAATGATTCGGGCTTTGAGGTCACTGGCTCAGTTTGTGATGTATCAGTTCCAAAGCAGAGGGAGGCGCTCATGGAGTCTGTTTCCTCTCTTTTTCACGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCGGTGACAGACTTCACAAGTGCAGAGTTTTCCACACTTATTGATACCAATTTGGGATCAGTCTTTCACATATGTCAACTTGCATATCCACTTTTGAAAGCATCGGGAATGGGAAGTGTTGTGTTTGTCTCTTCTGTCTCTGGTTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATCAATCAACTCACAAGAAATCTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAGAACTTCAATGGTTGAGCAGGTGCTGAGCAAGAAAGAGTATCTGGAAGAAGTGTACTCTAGAACTCCTCTTAGGCGGCTAGGAGATCCAGCAGAAGTCTCTTCTCTTGTTGCGTTTCTTTGCCTACCAGCATCGTCATACATCACTGGCCAGATTATTTGTATTGATGGAGGAATGTCCGTGAATGGTTTCTACCCAACAACGCAGTTCTAA 921 0.4528 MHQLSLINPTSYLPLPSNRTTTTTSFIFNHVRKISKSNCIRSQSTQQRWTLQGMTALVTGGTRGIGRAIVEELTGFGARVHTCARNEHDLTECLKKWNDSGFEVTGSVCDVSVPKQREALMESVSSLFHGKLNILINNVGTNIRKPVTDFTSAEFSTLIDTNLGSVFHICQLAYPLLKASGMGSVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIRTSMVEQVLSKKEYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICIDGGMSVNGFYPTTQF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00933 306 FunFam Short-chain dehydrogenase reductase 42 300 - -
Phac11g00933 306 PANTHER TROPINONE REDUCTASE 47 299 IPR045000 GO:0016491
Phac11g00933 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 298 IPR036291 -
Phac11g00933 306 Pfam Enoyl-(Acyl carrier protein) reductase 62 296 - -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 259 279 IPR002347 -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 130 141 IPR002347 -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 224 241 IPR002347 -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Phac11g00933 306 PRINTS Glucose/ribitol dehydrogenase family signature 177 193 IPR002347 -
Phac11g00933 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 191 IPR002347 -
Phac11g00933 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 141 IPR002347 -
Phac11g00933 306 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Phac11g00933 306 Gene3D - 35 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00933 Phac-Chr11 6002454 6005593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00933 47 300 Miscellaneous Gene Families AT2G29290 63.780 1.95e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00933 K08081 - gmx:100799534 545.814