Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00778 ATGGCCGTCAACGACGCCGATCAATCCAACAGGGCTCACAGGAGCCGCCAATCCGGTTCCAAATCCGCCAAGAAGAAAAGTAAGAAGAAGCAGAATCAGGATGACGGAGGAGAGGATCAGAAACACCAAAACCCTAAGGCATTCGCCTTTTCTTCCTCCAACAAAGCCAAGCGGTTGCAATCACGTACCGTCGAGAAAGAGCAGCGCCGCCTTCACGCTCCCATCATTGACCGCTCCTACGGCGAAGCAGCACCATTCGTCGTCGTTGTGCAGGGTCCTCCTCAGGTTGGGAAGTCACTTCTGATTAAATCTTTGGTTAAACATTACACGAGACATAATTTGCCCGAAGTTCGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGCGGGTGCAGTTTGTGGAATGTCCGAATGATATCAATGGCATGATAGACGCGGCGAAGTTTGCTGATCTAGCGCTTCTTCTCATAGATGGGAGTTATGGTTTTGAAATGGAAACCTTTGAGTTCCTAAATATATTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTCACCCATCTTGATAAATTCAAGGATGTGAAAAAGTTGAGGAAAACAAAACAAAGACTTAAACACCGGTTTTGGACAGAGATATATGATGGCGCTAAACTATTTTACTTATCAGGCCTAATTCATGGAAAGTATGTTAAGCGGGAAGTTCACAATCTTGCTCGATTTATTTCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCACCCTTATGTTTTAGTTGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCACGCAAATGATAAATGTGATAGAAAAGTCACCCTTTATGGTTATCTTAGAGGATGTAATTTGAAAAAGGGCAATAAGGTACACATAGCAGGAGTGGGTGATTATAGCTTAACTTGTATTACTGCTTTACCCGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGGGATAAGGAAAGATTATTCTATGCTCCTATGTCTGGACTTGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAACGACCACCTTGTTCAATTCTCAAAAGTTGATGGTGAAAACTCTGCTATGACAAGCAAAGGAAAGGACAGAGATGTAGGAGAGGTTTTGGTGAAATCACTACAGAATACCAAATACTCGATCAATGAAAAGCTGGAGAACAGCTCTATCAGTCTTTTTGGTGAAAAGCCTAAACTAACATCAGAAGCTCTCGCTGATGCACATGGCACAAACAATGATGTAGAACAGACTGAGTCTGTTATAAACTCAAAGGATTTGGATGGTTCAGAATCATCTGATCAGGATGAAGAGGACACCTTGAAAGAAAGTGAAGCTTCTGGTTCTGACGATGAAGATTCACCAAATAGTAATTCTTTGAATGGAGACCAAATACAAGAACATATTGAGTTTCATGATGGAAGACGAAGGCGGAGAGCAATATTTGGAAATGATACTGATCAAAGTGATGTGATGGATTCAGAAGGAGACGAGGATGGTGTTGCCAGTGATGATGATCTTGCATCTTCTGATTCAGAATCTTCAGAAGAAGAGGAGGAAGATGATAACGTTGACACAAATGAAGATGGCATGGGTAATGTTTCCAAGTGGAAGGAGTCTTTGGCAGAAAGAACTCTCTCACGGAAAGTTCCTGGCTTGATGCAACTTGTGTATGGGGAATCTACTAATAATTCAATCACTACAAACACACAGAATGATAATAGTGGAGATGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGAAGTGAAAAAGCAAAACATGAGAGATGGATTGGATGATGATGGAGTGGTCAACACTGAGGATTGTTCCAAGTGTACACAATTTCTGAATCAGAGATGGGATGAGGAGATTCGGAACCGCTTTGTGTCTGGCAATTTGGCAAAAGCTGCACTCAGAAATGCATTACAATCAGCTAATACTGAAGGAGAAGATGATGATGTCTATGGTGACTTTGAAGATTTGGAAACGGGAGAAAAACATGAGAATTATCGAACAGATGATGCTGCAACAACACTCAAGGGAGATGATTTGGAAGCTGAGGAGCGGAGGCTTAAGAAACGTGCTCTCCGTGCAAAATTTGATTCTCAATTTGATGAGGACCCTGGTTCACCAGAAGAAGACACTGGTAATGAAAGTGAACACAAGTTCCATCGTGGTCAAGCTAATGAAAGTACCTATTTTGACAAGTTGAAGGAGGAGATCGAACTCCAGAAACAAAGGAATATAGCTGAACTCAATGATCTTGATGAAGATACCCGATTGGAGATAGAAGGCTTCCGAACAGGGACATACCTAAGGTTGGAGGTTGATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTACCATCCAATATTGGTTGGAGGGGTTGGTATAGGGGAGGAAAATGTTGGATATATGCAGACAAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGATCCAATTATTGTATCTGTTGGATGGAGGCGTTACCAGACAACCCCAGTTTATGCCATTGAGGATAACAATGGAAGGCATCGAATGCTTAAGTACACTCCGGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACTGGGGTTGTAGCTGTTCAGAGTTTATCAAACAATCAGGCAACATTTAGGATTACTGCCACTGCAGTTGTGCTGGAGTTTAATCATGCAGCAAGGATAGTGAAGAAACTCAAATTGGTTGGTTATCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATTAGGGGGCAGGTCAAGAAGGTTGCAAAAGAAGAAATAGGTAATCAAGCCAAAAGGAAGGGTGGGCAAACTAAAGAAGGAATTGCTAGGTGCACTTTTGAAGATAAAATCCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTCCCTCAGTTTTATAATCCATTGACAACTGCATTACAGCCTCGTGAAAAGACCTGGAAAGGAATGAGGACCGTTGCAGAATTGAGAAGAGAACACAATCTTCCTGTTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAATCCATTGGTAATTCCCAAGTCTCTTCAAGCAAGTCTTCCCTTTGCCTCAAAACCCAAGGATATACCCAAGCGAAAGAAGCCCTTACTTGAAGAGAGAAGGGGAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTTCATGCTCTTGTTCAACATCTCCAGTTAATAAATAATGAGAAGATGAAAAAGCGAAAGCTTAAGGAAGAGAAGAAAAGGAAAGAACTTGAAGCAGAGAGAGCAAAAGATGAGCAGTTGTTGAAGAAGCGCCGGAGAGAGGAAAGACGTGGGAAATACCGGGCAGAAGACAAGCAGAACAAGAGAATTCGGAGAGCATAG 3573 0.4209 MAVNDADQSNRAHRSRQSGSKSAKKKSKKKQNQDDGGEDQKHQNPKAFAFSSSNKAKRLQSRTVEKEQRRLHAPIIDRSYGEAAPFVVVVQGPPQVGKSLLIKSLVKHYTRHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANDKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYSLTCITALPDPCPLPSAAKKKGLRDKERLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDGENSAMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSSISLFGEKPKLTSEALADAHGTNNDVEQTESVINSKDLDGSESSDQDEEDTLKESEASGSDDEDSPNSNSLNGDQIQEHIEFHDGRRRRRAIFGNDTDQSDVMDSEGDEDGVASDDDLASSDSESSEEEEEDDNVDTNEDGMGNVSKWKESLAERTLSRKVPGLMQLVYGESTNNSITTNTQNDNSGDEESDDDFFKPIEEVKKQNMRDGLDDDGVVNTEDCSKCTQFLNQRWDEEIRNRFVSGNLAKAALRNALQSANTEGEDDDVYGDFEDLETGEKHENYRTDDAATTLKGDDLEAEERRLKKRALRAKFDSQFDEDPGSPEEDTGNESEHKFHRGQANESTYFDKLKEEIELQKQRNIAELNDLDEDTRLEIEGFRTGTYLRLEVDDVPCEMVEYFDPYHPILVGGVGIGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDNNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAVQSLSNNQATFRITATAVVLEFNHAARIVKKLKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPREKTWKGMRTVAELRREHNLPVPVNKDSLYKKIERKPRKFNPLVIPKSLQASLPFASKPKDIPKRKKPLLEERRGRGVVMEPRERKVHALVQHLQLINNEKMKKRKLKEEKKRKELEAERAKDEQLLKKRRREERRGKYRAEDKQNKRIRRA* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00778 1190 Coils Coil 1128 1174 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 426 446 - -
Phac11g00778 1190 FunFam BMS1 ribosome biogenesis factor 86 248 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 1140 1190 - -
Phac11g00778 1190 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
Phac11g00778 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 222 IPR027417 -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 576 601 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 508 545 - -
Phac11g00778 1190 SMART DUF663_2 694 1023 IPR007034 -
Phac11g00778 1190 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 248 IPR030387 -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 484 502 - -
Phac11g00778 1190 Coils Coil 758 778 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 1 67 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 734 749 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 449 464 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 576 592 - -
Phac11g00778 1190 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 1174 IPR039761 GO:0042254
Phac11g00778 1190 CDD BMS1 47 276 IPR037875 GO:0005525
Phac11g00778 1190 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 703 1024 IPR007034 -
Phac11g00778 1190 Gene3D - 86 248 IPR027417 -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 720 749 - -
Phac11g00778 1190 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Phac11g00778 1190 MobiDBLite consensus disorder prediction 469 483 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 28 42 - -
Phac11g00778 1190 MobiDBLite consensus disorder prediction 426 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00778 Phac-Chr11 5024735 5033203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00778 K14569 - gmx:100792176 1947.94