Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00721 ATGAAGGCTTTGAGTGCCATAAACTCCACAAATCCATGTCTTCCCAAAACCCATTTCCTCAAAGTCCCTATCTTTCACCCCTTCTTCAAATTCAATCCATTCTCACACTCATACAACACCCATGCCCATGCTGCAAACAGAGCTCACAAGCTTCCAATCACCATCAGCTGCAAGCTGAAAAGCTCCCAAGATGTGAAAAACAAAGGGAAGAGCGTGTCCCAGAAGATTGTCTTATCAGAAACTTCCCCTCCACCACTCACTGAGGATGATGGCACCAATTCTGACAGTGGGGATGTTCCACAAAGCTCAAAGAAAAAAAAGGGAGGCCCTTTTGAGGTGCTCATCATGTTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCATTGGCTATTGCGGACATGTTCGTTGCTGCTGCTTTGATGGCTTTGGGAACACTTATTGAACAAGGTGAAGCCCCTGACTTTTATATCCAGAAATACTCTGAAGATAATCCTGTGTTTGGATTTTTTACTTGGAGATGGATTCTCGCCCTTGGTTTTGATCATATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACATACACAACTCAACTCCCCCTCATCAAGGTTTCAAGAAGATGGTCATTTTTGCATTCTGCTGAGGCCATACGCAAGCAAGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATTTTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCCTTTAAAGGACTTGCAGGTCGGTTGGCCCCTGTGGGAGTTCATATAGCACTGCTACTTGTAATGGCTGGAGGAACTGTTAGTGCTGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTTCTGGCTCCTTCCGGCTTTCTCGCTTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTTTGAGAGTGGAGAGGTTTCACAATTCCACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAAACAATCAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATATCAGACAGATTGGAGTATTTCGGCTCTGCAAATTATTAAGGATAATGAAGGACCGTATAACTTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCCCGTGATCTACAGTCAATCGTCCTTTACGATAAGGAAGGAAAATTTGTGGGAGTTAGACGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCTTCGTTGGAGGAAAGACTAACAGAGCAAAGATGGAGTTTCCAGAGGAGATGAACCGCTTACTTGATAAAGTCCCTGAAATTGTTGAATCAACTCTATCTAAGCAAGCTGATAGCGTTAGTGGTTAG 1701 0.4315 MKALSAINSTNPCLPKTHFLKVPIFHPFFKFNPFSHSYNTHAHAANRAHKLPITISCKLKSSQDVKNKGKSVSQKIVLSETSPPPLTEDDGTNSDSGDVPQSSKKKKGGPFEVLIMFRRKTLQILSSLPLAIADMFVAAALMALGTLIEQGEAPDFYIQKYSEDNPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLAPSGFLASPTEAFNTEIHVNRFYMDYFESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQIIKDNEGPYNLAMAPLQINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFVGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKMEFPEEMNRLLDKVPEIVESTLSKQADSVSG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00721 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 118 547 IPR023494 -
Phac11g00721 566 Pfam ResB-like family 130 392 IPR007816 -
Phac11g00721 566 Pfam ResB-like family 430 542 IPR007816 -
Phac11g00721 566 MobiDBLite consensus disorder prediction 66 106 - -
Phac11g00721 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 68 555 IPR023494 -
Phac11g00721 566 MobiDBLite consensus disorder prediction 66 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00721 24 561 Miscellaneous Gene Families AT1G49380 66.912 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00721 K07399 - gmx:100807003 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00721 11 4694240 4698632 Phac11g00721 11 4694240 4698632 ECH