Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00701 ATGGTGCTTCAAGCTTTGTCAGTGCCCGCGAGTGCCAGCTTCACTATAGCTTCTTGCTCCAGAACTCCCTCCCACCTAGTATTTTCTAACAGAAACTGTTCGATAGCTTCTTCTTTTCCTAGCCCATATGGCAATTCATCAGAAGATGGGTTATCAAGTAAAAGCCGTGGCTTTCGTTTAAAATTTGATGAGAAAAATATCTATGGTGCTAGTACAAGTTATGGTGCAATTGAAGCCAAGAAGGGGAACCCACCAATATCACCAGCAGTGATAACTCCCGAAGGACCACTTGATCTGTCATCTGTTTTGTTCAGGAATCGTATAATATTCATAGGGCAGCCAATCAATTCACAAGTGGCTCAGAGAGTTATATCACAGCTTGTGACTCTTGCTACTATTGATGAAAAATCAGATATACTGATATACCTAAATTGCCCTGGTGGAAGCTCGTATTCAGTGTTGGCAATTTATGATTGCATGTCTTGGATAAAGCCCAAGGTTGGTACTGTATGTTTTGGAGTAGCTGCAAGCCAAGGAGCACTTCTTCTTGCTGGAGGAGAGAAGGGAATGCGCTATGCAATGCCAAATGCTCGCATTATGATACATCAACCACAGAGTGGATGTGGGGGTCATGTTGAGGATGTCAGACGCCAAGTGAATGAAGCTGTTCAATCTCGCCATAAAATTGACAAGATGTATAGTGCTTTTACGGGGCAGCCACTAGAGAAGGTGCAGCAGTACACAGAGAGGGACCGTTTTCTGTCTGTTTCTGAGGCTTTGGAGTTTGGTCTGATTGATGGTGTCCTGGAAACAGAGTATTGA 822 0.4367 MVLQALSVPASASFTIASCSRTPSHLVFSNRNCSIASSFPSPYGNSSEDGLSSKSRGFRLKFDEKNIYGASTSYGAIEAKKGNPPISPAVITPEGPLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEKSDILIYLNCPGGSSYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYSAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00701 273 FunFam ATP-dependent Clp protease proteolytic subunit 78 273 - -
Phac11g00701 273 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 68 272 IPR023562 -
Phac11g00701 273 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 86 272 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 CDD S14_ClpP_2 98 268 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 Pfam Clp protease 98 271 IPR023562 -
Phac11g00701 273 SUPERFAMILY ClpP/crotonase 96 271 IPR029045 -
Phac11g00701 273 ProSitePatterns Endopeptidase Clp histidine active site. 191 204 IPR033135 -
Phac11g00701 273 PRINTS Clp protease catalytic subunit P signature 169 186 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 PRINTS Clp protease catalytic subunit P signature 138 158 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 PRINTS Clp protease catalytic subunit P signature 190 209 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 PRINTS Clp protease catalytic subunit P signature 98 113 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 PRINTS Clp protease catalytic subunit P signature 247 266 IPR001907 GO:0004176|GO:0004252|GO:0006508
Phac11g00701 273 Gene3D - 81 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00701 Phac-Chr11 4548311 4551852 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00701 K01358 - gmx:100799710 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00701 11 4548311 4551852 Phac11g00701 11 4548311 4551852 ECH