Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00661 ATGGGGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTATCACTTAGCGAAAGAGCATGGATACAGGTCTCGAGCTTCATGGAAGCTGGTCCAGCTCAATTCCAAGTTCCAATTCCTCGAGTCCGCACGCTCCGTCCTCGACCTCTGCGCCGCCCCCGGAGGCTGGATGCAGGTGGCGGTGCAGCGCGTCCCCGTAGACCACCTCGTCATCGGCGTGGACCTGGCACCCATCGCCCCTATCCGCGGTGCCATCGCCATCCAGGAAGACATCACCAAAACAGAATGCAAGTCCCGCATCAAGAAGCTCATGGGCCAGCACGGATGCCGCGCCTTTGACGTCATTTTGCACGACGGCTCTCCCAATGTCGGCGGCGCCTGGGCTCAGGAAGCCATGAGCCAGAACGCTCTCGTCATCGATGCCGTCAAATTAGCCACTCAGTTCTTAGCGCCCAAGGGTACCTTTGTCACCAAAATTTTCAGGTCGCAAGATTACAGCTCCGTGGTGTATTGCCTGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCTGCGGCTAGTCGATCTGAATCTGCTGAGATATATGTTTTGGGGCTTAGGTACAAGGCTCCTGCCAAGATTGATCCGCGACTTCTTGATGTGAAGCATCTCTTTCAGGGGTCTGTGGAACCGCAGCCCAAGGTGGTGGATGTACTTAGAGATACTAAGCAGAAAAGGCATCGTGACGGCTATGAAGAAGGAAACACAACTTTAAGGAAGATGTCTTCAGCTTCAAATTTCATTTGGTCAGATTCTCCTCTGGAGATCCTTGGTTCAGTCACTTCTATAACTTTTACTGATGCAGCTGATTTACCAATCAAGGATCATGAGCAAACAACTGAAGAGGTCAAATCTCTCTGCGATGATTTAAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGAGGATTCACATTAGAAAAGCTCTTTCACCAACTCAAAAGCCTGATCCTACTACTAAAGAACAGACAAAAACTGAGCAGAAGGTGGATGAAGAAGATATATTACTCAATGAAATGGAGGAGCTGACTAATGTGATGGACCGCAAGAAGAAACATGCAAAGAAGCTTCTTGCTAAAAGAAGAGCCAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATGGATGCAGTTGAAGATGGTTATGTAGATCAGGAGTTGTTTTCTCTTGCCTCTATAAAGGGTAAGAAAGATCTGGTAGCTGTTGACAACACTGAGTATGAAGGTGACGAGGGTGAAGTAGAAGATAGTGAGAATGAAGAAATCCATGAAGTCCCAGGGCATTCATCCAGTGACTTGGAAGATTCTGACGAGGAGCGTAAAAGATACAATGAGCAAATGGAAGATTTGTTGGATAAAGCTTATGAGAAGTTTGTCATCAGAAAGGAAGGAAGTTCAAAGCAGCGGAAGCGAATTAAAAAATCCTATGATGCAGAGGCCCAACTTTTGGAGGGCGGGGAGGATGATGATATTGCTCAATCTATGTATGATTCCGATGAAGATCAGGGTGAGCAAGAAGCAAATCCATTGATGATGCCACTTAATGACGGTGCTGAACTCACCCAAGAGGAGATAACAAATAAGTGGTTTAGTCAGGATGTCTTTGCCGAAGCTGCAGAGGAAGGAGACTTTGAGAAGGATGAGAGTAAAGATGAAATGGATGTAGATGATGAGCCTAAGGAGAAGAAATCCATTGCCAAAAAGGTAAAAGAAAATAAAAAAGCAGCTCCAGCAGTAGAAGATCACCCTCAACCTCAAGCATCATCCAAGACAGCAGATGATTTTGAAATAGTTCCTGCGCCTGCCACTGATTCAAGTGATGATTCATCCTCTGATGAGTCGGAGGAAGATATCGAAGCCAAAGCTGAGATATTGGCTTATGCTAAGAAGTTGGTGAGGAAAAAACAACGAGATCAGATATTGGATGATGCATATAACAAGTACATGTTTGATGACGAAGGATTGCCCAAGTGGTTTCTAGATGAAGAGAAGAAACACCGCCAACCAGTAAAGCCTATTTCGAAAGAGGAAATTGCTGCAATGAAAGCGCAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTGGCGGAGGCCAAAGCACGGAAGAAGCGTGCTGCAATGAAGAAGCTTGAGAAGGTACGGAAGAAGGCGAATGCCATATCAGATCAAACAGAGATATCTGATCGTTCGAAGAGGAAGCAAATTGAACAACTCTATAAAAAGGCTGTTCCGAAGAGGCCTAAAAAGGAATATGTAGTTGCAAAGAAAGGTGTACAAGTAAAGACTGGCAAAGGAAAAGTCCTTGTTGATCGAAGAATGAAGAAGGATGCTCGGAAACGTGGACAGGGTAGGGGAGGAAAAGGAGGTTCCAAGGCGAAGGGCAAGGCTCCAAAGGGCAAAGGAGCTTCTAAGGCCTCCTCTGCCAAAAAGGGAAAACAGAGGACTAAGGACTAA 2502 0.4612 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFQFLESARSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKTECKSRIKKLMGQHGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGTFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEEGNTTLRKMSSASNFIWSDSPLEILGSVTSITFTDAADLPIKDHEQTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPTQKPDPTTKEQTKTEQKVDEEDILLNEMEELTNVMDRKKKHAKKLLAKRRAKDKARKATGMQMDAVEDGYVDQELFSLASIKGKKDLVAVDNTEYEGDEGEVEDSENEEIHEVPGHSSSDLEDSDEERKRYNEQMEDLLDKAYEKFVIRKEGSSKQRKRIKKSYDAEAQLLEGGEDDDIAQSMYDSDEDQGEQEANPLMMPLNDGAELTQEEITNKWFSQDVFAEAAEEGDFEKDESKDEMDVDDEPKEKKSIAKKVKENKKAAPAVEDHPQPQASSKTADDFEIVPAPATDSSDDSSSDESEEDIEAKAEILAYAKKLVRKKQRDQILDDAYNKYMFDDEGLPKWFLDEEKKHRQPVKPISKEEIAAMKAQFKEIDARPAKKVAEAKARKKRAAMKKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAVPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGQGRGGKGGSKAKGKAPKGKGASKASSAKKGKQRTKD* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00661 833 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Phac11g00661 833 MobiDBLite consensus disorder prediction 497 519 - -
Phac11g00661 833 Coils Coil 709 739 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 722 749 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 793 814 - -
Phac11g00661 833 Coils Coil 355 375 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 771 833 - -
Phac11g00661 833 Pfam Spb1 C-terminal domain 604 796 IPR012920 GO:0005634|GO:0006364|GO:0008168
Phac11g00661 833 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 336 - -
Phac11g00661 833 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Phac11g00661 833 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Phac11g00661 833 MobiDBLite consensus disorder prediction 422 461 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 325 344 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 568 593 - -
Phac11g00661 833 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Phac11g00661 833 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Phac11g00661 833 FunFam AdoMet-dependent rRNA methyltransferase SPB1 19 208 - -
Phac11g00661 833 Coils Coil 448 468 - -
Phac11g00661 833 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Phac11g00661 833 MobiDBLite consensus disorder prediction 553 567 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 728 749 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 436 461 - -
Phac11g00661 833 MobiDBLite consensus disorder prediction 495 633 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00661 K14857 - gmx:100790741 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00661 11 4383707 4388887 Phac11g00661 11 4383707 4388887 ECH