Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00412 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCCAAGGCCAATGGCCACTTGAGTTTGGGCGATCTTGTGCTTGCTAAGGTCAAGGGCTTCCCCGCATGGCCTGCTAAGATAAGCAGGCCTGAGGATTGGGAGAAAATCCCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATTGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAGTGAGGCTAAAAATAAGCTGTCAGCTCGTCTTCATGGCAAGACTAAGCACTTTTCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACATAAGGCTAGTGGTTTGACTGATGACACTGACGATTCTCGTATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGTTAACCTTAAGGATGCAATTGACTCTGTGTTATCAAGTGCAGAAAAAGATAACATCGATATGGATAATGTTGGTTCTAATCTGGAGCACTGTACACAGAGAGTAGGGGAGAATGACAGCCTAGATGAAAAATACTCTGTATCCGACCATCCAAACGAAAGTTCTTCTGTTTCATCACCAGTGATCAAAAGTAAATTATCCATGGGTTCAGAGCCAAAGAAGAATGCTAACAAATCAAGTCTTAAAGGTGCTAGTAATGTTAATGATTTTGGGCAAGATGATAATAAACACAGTGGTATAACAAATGGGACCAAGCCAAGAAAGCTTGTCAATGGCTTGCGAAAAAGAAGTGAAGCTGCAGGTGATAGAGATAGAAATGGTGGATCATCTACTGGAATTCTTAAGGAGGGAAATTGTACTGGTCGTGGTGACCTTTCTAGGTCCAGAGAGACAATGAAAGCTGGGAAGAAAAGGAAAACGGCATTAGATGTTAAATTGGATTCTCCAGACACTCTTAAATCAGACAATAATGGTAATACTGGGGAAAAAGATAGCATCATGATGAAAGTCAAAACAAGTCTTGAGGTAAAAAATGAGTTCCCTGAGATCTTGTTTCATTCCAAGGATGCTGATGGTAAAAGTTCTAGTTTGCGGAAGAAGATGCAACTTCATGGAACCTATAATTTAGGGGAAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGCATGGATACCAATGATGATTCAACTTTGGGATATCCTTCAAAAGTTCTGAAAAGAAATTCGCCAGGTTCTACAGTTATTGAAGACAGACCATTGAAAAAGTCAGAAATGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGTCATCAAGGGGTCAGATTAGTGGTGCGGGTTCTGATGATTCTGTCCATGAGCTGCTATCAGCGACTAGACATCCGATCCAGGTTCAAAAAGTTATGCCCGATTCTTCAATCATTGCATCTGAGGAAAAGAAAGAAAGGAATTATCTCAAACTGAAAGGTGATACAAGTAATGTTATGATAAAACAAGTAGAGAGGAAACGTAGAGCTGTTTGTCTTTTTGATGACGATGATGACGAACCTAAAACTCCTGTTCATGGAGGAGCTGGAAAGAATGTTAAATCGTCTTCTGTTTCAGAGGTCAAGAAGAGCAACAATGCACACTCTGAAAAGTTTGATGTTCCACTGGCTCAAAGAATTTCTAGTGAGCTGGAGGATACCCATTTGAAGGAGCCACCCTCTCAATTACATAATGACAGTTTGTCAATCAAGCAGCCACTAAAAGAGAAAGATAGAGAGAAAGATGACAAAGTGATTCCTGTGCATATTCCTCATAGTCCTGAAAAATTAGAGTCGAAGCAGCTTCCCTCCAATGCAGCAAAATTGAGCTCTGTCTCTCCACTAAAATCACCTCAATTGGTACCTGCAAGTAAGTCAAATGCGGAGCGGAATAAAGCTTCCAAACTGTCACTTAAAGTTTCCAGTAATGCTACTCAAAAGAGGGCTGATCATGGGCCTTCAAAGTATTCACATAACTTTAGCTCTTCTCAGAATGAAGTTGCTACACATAAAAAGAAGCTTGCAACGTCGGCGGAAATTTCTAAAACTACACCGGAGACATTGTTTCAGGCAGTTGAAGTTCCTGTTTCAACCATTGGTTTGAAGGATACTGATGCTCTACATGTTGATAGATTGGAAGAAAGCACAGAAGATAAAAGTACTATGAAGCATCTTATTGCTGCTGCCCTGGCAAAAAGGAAACAGGCCCATTCACAATTTCTTCCTTCTGGCTTTCCCAATGTTCAGGGGGAAACTCCTAGCCCGTCTACAGTTCAGCCATTTCTGTCTGTCTCGGGCAATTTTCTGCATGCAGATATGCAAGGAGTTTATGAGCAAACATCATTGGTTTCTCCACCAGCTAAAGAACATCATTCTGCTTCTTGTAATCAGCTTGATGCTGATGAAATTGAGGATAGAAGAGTTGATTCAGAGCAAAGGGGTATAGGAGGCTCACTGAGTGGTGGTACTGAGGCTGCTGTTGCCCGGGATGCTTTTGAAGGAATGATTGAGACATTGTCGAGGACCAAGGAAAGTATTGGTCGTGCAACCCGTCTTGCCATTGACTGTGCCAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATACGAAAGCTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAATCAAAAAGGCATTGCAGGAGCATCCTACATTCCCACTGTTCAGGCAGCGTTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGCCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTCCTCAATCAGTTCTTCGCCGTTACATGGATGATATTGGAATTTCAAATGATGATATTACAGTTAGCTTATCTCTCAGACGTCCATCTCGTGCAGAGCGAGCTGTGGATGACCCTATTAGAGAAATGGAAGGCATTGTTGACGAATATGGAAGTAATGCTACATTTCAACTGCCTGGCTTTTTATCTTCACATGCATTTGAAGAAGATGAAGATGAATATGAAGATGATATACCAACGAAATTGTGTAAGGAGACATATGATGCATCTCCAGCAGATCCCACCCATACCCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATCGTGAGCTGGAAATGGAAGATGTTTCAGGTCATCCAAAGGATGAAAGGCCCACATTTTTTAACATTTCCGATGAAATTGATTTGCAACTTCAGTTGTCAGATAGAAATTTGGATCTGACTCCAAACATTTCAGAAGAGATGTCAGCTACTCCTGAGGGCTCTCCTCCTTTGCCACTTGATTCACCTCCTCCACCCCCACCATTGCCTTCATCACCACCGCCCCCTCCTCCTCCATTATCACCATCTCCTCCCCCACCCCCACCACCCCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCATCAGCCCCTCCAGTGTCCTTGGCTCCTCAATCATCGGGACCAGCTCGGCCACTTCTGTCCCAACCATTACTGCCATCTCAGTCGTCACATCAGTCATCCCCACAGTTGGGGTATCAGCAGAGTGTACCTCATGATTTTAGTGGCACAAATAATGGTAACCAAATAGTTCCAATGGCTGGGAATTCTTTTCCTGGAGGTCACAATAATGCAGCTGTCAAGAATGAAGTATTTCCACAGCCACCTTCTTATGCTTCAACAGCAGGGTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAGTACGGACAGAATGATATGTATCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGTAATCCCCCATATGCACAGAGGCACACACATCCTGCCCCACCACAAAACCCACCAAATCCGTATCCATATTCAAATCCTACAGTTCAGCAACATCTTCCACATTCATTCCATCCTCCCTTCCCTTTACCATCTCTTCCTGATGGAAGGAGACAATTTGTTGCTGATGAGCAATGGAGAATGCCATCTAGTGAATATAAAACAAACAATCAACATAGTGTATGGAGAGGGAGAAATCCATCATGTCCTGGTCCACCCTATGGGCAAGAAGTATATTCAAGCTTGTTCACAGCTTATAGTGGTTGA 4185 0.4294 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKIPDPKKYFVQFFGTKEIAFVAPADIQAFTSEAKNKLSARLHGKTKHFSQAVKEICAAFDEMQKHKASGLTDDTDDSRIGSEAPSNDGVVVNLKDAIDSVLSSAEKDNIDMDNVGSNLEHCTQRVGENDSLDEKYSVSDHPNESSSVSSPVIKSKLSMGSEPKKNANKSSLKGASNVNDFGQDDNKHSGITNGTKPRKLVNGLRKRSEAAGDRDRNGGSSTGILKEGNCTGRGDLSRSRETMKAGKKRKTALDVKLDSPDTLKSDNNGNTGEKDSIMMKVKTSLEVKNEFPEILFHSKDADGKSSSLRKKMQLHGTYNLGENESLHATKKLKRMDTNDDSTLGYPSKVLKRNSPGSTVIEDRPLKKSEMKKSTPNLKTEKSLSSRGQISGAGSDDSVHELLSATRHPIQVQKVMPDSSIIASEEKKERNYLKLKGDTSNVMIKQVERKRRAVCLFDDDDDEPKTPVHGGAGKNVKSSSVSEVKKSNNAHSEKFDVPLAQRISSELEDTHLKEPPSQLHNDSLSIKQPLKEKDREKDDKVIPVHIPHSPEKLESKQLPSNAAKLSSVSPLKSPQLVPASKSNAERNKASKLSLKVSSNATQKRADHGPSKYSHNFSSSQNEVATHKKKLATSAEISKTTPETLFQAVEVPVSTIGLKDTDALHVDRLEESTEDKSTMKHLIAAALAKRKQAHSQFLPSGFPNVQGETPSPSTVQPFLSVSGNFLHADMQGVYEQTSLVSPPAKEHHSASCNQLDADEIEDRRVDSEQRGIGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPQSVLRRYMDDIGISNDDITVSLSLRRPSRAERAVDDPIREMEGIVDEYGSNATFQLPGFLSSHAFEEDEDEYEDDIPTKLCKETYDASPADPTHTLGESETSTVTPNDKRHCILKDVDRELEMEDVSGHPKDERPTFFNISDEIDLQLQLSDRNLDLTPNISEEMSATPEGSPPLPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPPPPLPPSAPPVSLAPQSSGPARPLLSQPLLPSQSSHQSSPQLGYQQSVPHDFSGTNNGNQIVPMAGNSFPGGHNNAAVKNEVFPQPPSYASTAGCSSQEPSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPYAQRHTHPAPPQNPPNPYPYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRMPSSEYKTNNQHSVWRGRNPSCPGPPYGQEVYSSLFTAYSG* 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1112 1380 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 421 436 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1301 1318 - -
Phac11g00412 1394 ProSiteProfiles CID domain profile. 823 964 IPR006569 -
Phac11g00412 1394 SUPERFAMILY Tudor/PWWP/MBT 15 109 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 384 398 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 112 132 - -
Phac11g00412 1394 SMART PWWP_4 18 75 IPR000313 -
Phac11g00412 1394 Gene3D - 8 116 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 177 297 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 501 541 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1122 1175 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 556 663 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 277 297 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 406 420 - -
Phac11g00412 1394 Pfam PWWP domain 21 104 IPR000313 -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 597 663 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1043 1057 - -
Phac11g00412 1394 CDD PWWP_HULK 21 109 - -
Phac11g00412 1394 FunFam Enhancer of ag-4 2 823 966 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 185 240 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1034 1059 - -
Phac11g00412 1394 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1073 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 373 439 - -
Phac11g00412 1394 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Phac11g00412 1394 Gene3D - 822 965 IPR008942 -
Phac11g00412 1394 SMART 558neu5 830 961 IPR006569 -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1181 1226 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1247 1299 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 1355 1370 - -
Phac11g00412 1394 MobiDBLite consensus disorder prediction 569 595 - -
Phac11g00412 1394 Pfam CID domain 830 954 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00412 Phac-Chr11 3035307 3055750 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00412 - - ccaj:109798832 1750.33