Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00357 ATGGGAGAAGAAGGTGTTTGGAAAGGTGTTACAAAGAAAGGGGTCAACCTTGGGAAGGCTACCATATTAGCTCTTGGCAATGCTTTCCCTCCACAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGGAGCACAAACTGTGACAACCCTGAGCTTAAGCAGAAGCTCACTAGACTTTGCAAAACAACCACAGTGAAAACGAGGTACGTGGTTATGTCAGAGGAAATACTGATAAAGTATCCAGAGCTTGTGACTGAAGGCACCCCCACAGCAGTGACAGAAATAGCCATTGAGGCTGCACTAGGTTGCATTAAGAACTGGGGTGGATCATTATCAGACATAACACACTTGGTTCATGTGTCATCCAGTGAAGCAAGACTACCTGGTGGTGATCTTTACCTAGCGAAAGGACTAGGACTGAGCCCTGATACTCAACGAATCATGCTCTATTTCGCTGGTTGTTCGGGAGGTGTGGCTGGCCTACGTGTTGCAAAGGACATAGCTGAGAACAACCCTGGAAGTCGGGTGTTGCTTGCTACCTCAGAAACTACCATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCCTATGATCTTGTTGGAGTGGCACTCTTTGGGGATGGTGCTGGTGCCATGATAATTGGCTCAGACCCAATATTGGAGTATGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAAGAGTTTTTGCCACACACTGAGAAGAAAATTGATGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAACGGAACTTCCTCAGATAATTGAAGACAATGTTGAAGGATTCTGTGACAAATTAATGAGTGTTGTTGGGTTCCAGAATAAGGAGTACAACAAGCTGTTTTGGGCTGTACATCCAGGGGGACCTGCCATCTTGAATCGCATTGAGAAGAGACTTGATTTGTTACCCGAGAAGCTAAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAATGCTAGCAGTAACACCATTGTTTATGTGCTGGAGTATATGATAGAGGAGGCTCTCAAGACTAGAAAAGATGGTAGAGGAGATCCTGAATGGGGCTTGATACTTGCATTTGGACCCGGAATTACATTTGAGGGAATTCTTGCCAGGAACTTGTGTGCTTGA 1149 0.4552 MGEEGVWKGVTKKGVNLGKATILALGNAFPPQLVMQEYLVDGYFRSTNCDNPELKQKLTRLCKTTTVKTRYVVMSEEILIKYPELVTEGTPTAVTEIAIEAALGCIKNWGGSLSDITHLVHVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILEYEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLATELPQIIEDNVEGFCDKLMSVVGFQNKEYNKLFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEALKTRKDGRGDPEWGLILAFGPGITFEGILARNLCA* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00357 382 PIRSF PKS_III 8 381 IPR011141 GO:0009058|GO:0016747
Phac11g00357 382 Pfam Chalcone and stilbene synthases, C-terminal domain 230 380 IPR012328 -
Phac11g00357 382 Pfam Chalcone and stilbene synthases, N-terminal domain 11 220 IPR001099 -
Phac11g00357 382 SUPERFAMILY Thiolase-like 227 378 IPR016039 GO:0016746
Phac11g00357 382 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 15 380 IPR011141 GO:0009058|GO:0016747
Phac11g00357 382 FunFam Chalcone synthase 2 6 227 - -
Phac11g00357 382 FunFam Chalcone synthase 1 228 381 - -
Phac11g00357 382 Gene3D - 228 379 IPR016039 GO:0016746
Phac11g00357 382 CDD CHS_like 20 376 - -
Phac11g00357 382 Gene3D - 6 227 IPR016039 GO:0016746
Phac11g00357 382 SUPERFAMILY Thiolase-like 19 223 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00357 Phac-Chr11 2217843 2219489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00357 96 367 Miscellaneous Gene Families AT4G34250 25.581 7.49e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00357 - - vun:114168705 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00357 11 2217843 2219489 Phac11g00357 11 2217843 2219489 ECH