Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00338 ATGGAAGAAGAGACCAAAGTCATATCAGAAGTTCCAGGAACAAAGGTTGTTGTGGAGGCAGATCATAACAATGACAGTATCAAGGAGACAAATGGAGGTTTGCCAAGTGAAGTAAAGAAAGAAGAGGAAGACAATGCCTTGGATGGAGAATTCATAAAAGTTGAGAAAGAAGAGAATGCCATAGATGATAAGTCCCACAAAACTGAAAGAAGCTCAGATTCCCCGAGCAGAGAATTTCTAGAAGCTCAAGAGAAGATACAGGAACTTGATGTTGAACTCCAAAGACTAACAGAATCTTTGAAGACCTCTGAGCATGAAAACAATCATCTGAGGGGAGAGATCTCAGTTACAAAAGAGAAATTGGAGGAAAGTGGAAAGAAATACGAAGAGCTTGAAATGAGTCACAAGAAATTGCAAGAGCAGGTGGTTGAAGCCGAGAATAAATATAATCAGCAGCTCAGCAATCTTGAAGAGGCCCTTCAGAGTCAAGAAGTGAAGCAAAAGGAGCTTCTTAATGTGAAGGAAAAATTCGATGATATTAACCTTGAGCTTGAACACTCTAGAAAGAAGATGCAGGAATTGCAGGATGAGCTGAAACTTTCAGCAGACGAGGCTCGGAAATTCGAGGAGCTTCATAAGCAGAGTGGTTCACATGCTGAATCCGAGGGAAAGAAGGTCTTAGAATTTGAGAGATTACTTGAAGAAGCCAAACTGACTGCAAAAGGAATGGAAGATGAGATGGCCTCCCTTAAAGAAGAACTGAAAGGTGTTTATGATAAGATTTCTGAAAATCAAAAGATTGAAGAAGCACTTAAAACAACCACTGCTGAACTTTCTACTATCCAAGAGGAGTTGACACTTTCAAAATCACAGCTGTTGGAAGTTGAGAAAAGACTGTCTTCAAGGGACTCTTTAGTTGATGAGTTGACCCAGGAAGTAAACCTGATAAAGACATCAGAAACACAGCTAAAGGAAGACGTGTCAGCATTTCAAAATCTACTGGCCTCAACAAAGGAAGAACTGCAAGAAAAAAATTTTGAGTTGGAAACTGCAAGGTCCAAATTGCAGGAGGAGGAAAAATTGAAGGAATCAATTGAAGTTGCACTCAAGAATCAGGAAACACAGTTTCTAAATGTACAAGAGGAGCTGACTAAACTTAAAACAGAAAATGGAACTCTTGAATCAACCTTGGAAGATGTAACCCTTAATTCGAAGAAGTTTGAGGAGTTGTGCACTGATTTGGAGGAAAGACTAAAGCTATCAGATGAAAACTTTCTTAGAACAGATTTTCTTTTATCTCAGGCACTTTCAAACAACGCAGAGCTTGAGCTGAAGGTGAAGTCGCTGGAAGATCTTCACAATGAATCTGGAGCTGCTGCAGCTACTGCTACTCAAAGGAGCCTTGAACTTGAGGGACATATTCAGACTTCAGTTGAAGCTGCAGAAGTGGCAAAAGCACAATTGAGGGACCTGGAAACACGCTTCATAGCAGCAGAGCAGAAGAACGTGGAGCTTGAGCAACAACTAAACTTACTACAATTGAAAACCAGTGATGCTGACAGAGAAGTGACTGAATTGTCCGAAAAAATCTCCCATCTCAACGCTAAATTGGAAGAGGACAAGGAAGAGAAGAATCTTATTAATGGCCAATTGCAAGAGTATATGGAAAAGGTAGTTCAACTTGAATCAGACTTGAATAAATCATCTTTGCGGAGTTCACAATTAGAGGAGGAGCTGAAGATAGTCAATGACAAATGTTCTGAGCATGAAGACCGAGCCAGTATGAACCATCAGCGGAGCCGAGAACTGGAAGATTTAATCCAGAGCTCTCACTCCAAATTGGAAGATTCTGATAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAACTTGAACAACAAATAAGCGCATTAGAAGACAAATGCAGTGTTTCGGAAGCGCAAGCCAATAAATACCTCAATGATGTGTCTAATTTGACATCAGAACTTGAGGCAATTCAGGCACGAACCTCAACCCTCGAAAGTACACTGCAAGCAGCTAATGAAAGAGGAAAGGAGTTGGAAGATTCTCTGAATTCAATAATGGATGAAAAGAAGAAGCTAGAAGATGCTTCTAGCAGTTTGAACGAGCAGCTTGCTGAGAAAGAAAACCTAGTGGAAATTTTGAGGGATGATTTAAATCTCACACAAGGTAAATTGCAAAGCACTGAAAGTGATCTCAGGGCAGCTGAATTGAGAGAGAGTGATATAATTGAGAAACTTAAAGCTTCTGAAGAAAATGTTGTCATAAGAGGGAGAGATATAGAGGAGACTGCTACAAGACACTCAGAACTTCAATTGTTGCATGAGTCTCTGACAAGAGATGCAGAACAGAAACTCCAAGAAGCTATAGAAAAATTCAGCAAGAAGGATTCTGAGGTTCACTCTCTGCTTGAGAAAATTAAGATTTTGGAAGAAAAGATTGCACTGGATGGGGAACAGTCTACAACCTTGAAGAATGAATTTGAAGAGAGTTTGAGCAAACTGGCTGCTTTGGAAAGTGAAAATGAAGATTTGAAACGGCAAATTTTAGAAGCCGAGAGCAAGAGTTCTCAGTCTTTTTCTGAAAATGAATTATTGGTTGGAACAAACATTGAACTGAGAACCAAGATTGATGAACTTGAGGAATCATTGAACCGTGCACTATCAGAGAAGGATGTCACTACTCAAGAACTTGAGTCGCATAAGAACAGTATAGCTGAACTAAATGATTTACATTCAAAATCCACTAAAATTCAAAGTGCAAATGAATCCCGCATTCTAGAAGTAGAATCACAATTACAAGAAGCATTACAGAGGCATACTGAGAAGGAATCTGAAAACAAAGATTTGAATGAGAAGCTGAATACACTAGAGGGCCAAATAAAGCTTTTCGAAGAACAGGCACGTGAAGCAGTTGCAACTTCTGGAACTCATAAAGCTGAGCTGGAGGAGAGTCTCATAAAACTAAAGCACCTTGAAACTGTCATTGAGGAACTGCAAAACAAGTCACTCCACCATGAAAGAGAAACTTCAGGGCTAAATGATGAAAACTCAAAGCTTAATCAGGAAATAGCTATCTATGAATCCAAATTAAGTGATTTGAAGTCAGAACTCTCTGCAGCACTTGCTGAGAAGGATGAAACAGTTAAAGAGATACTCACCTCGAAGAATGCCATCGAAGAATTAGTGACAAAGCATAGTGCAGAGGTGCAGACATTGAATTCACAGTTATCTTCCGTGATTGATGAGAAGAACTTGCTCAATGAGACTAATCAGGATATAAAGAAGGAACTTCAGTCTCTTATACTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAATTGAAGGCTCTCTTAGATCTGAGATCGAAACTCTCAAAATTGAGATTGCTGAGAAATCTGTGTTGCAAAGACAGCTGGAGGAAATTGAAGGGCAACTGACAAAGTCTGCATCTAGACTAAATGAAGAGGTTGGAAGTGTTCAAGCTGCTGCTTCTCAAAGAGAAGCAGAATTAAATTCAAAACTGGTAGACTATGAACAAAAATTCAATGATAGAAATGTGCTGAATGAGAAGGTTGCAGAACTTGAGAAAGAGTTGCAACTTGCACGGGATGCTCTTGCTAACCAGAAAGAAGCAGAATCTCAGAAGTTGGAACTTGAGACAGCCCTGAAGAATTCTGTTGAAGAACTTGAAATTAAGAAAAAGGATATCTCTCTTTTACAGAAACAAGTGGCAGATCTAGAGCAGAAATTGCAACTGGCTAGTGATAAATCCTCATTTAAGGGTGATGAGGGTGCTGATAAAAAAGAAGGGTTGGAAGTGAAATCCAGAGACATTGGATCAAGCCTCTCGACTCCATCAAAAAGGAAAAGCAAGAAAAAGTCAGAAGTACCAAGTGCTCAAACATCATCGTCGTCCGAGACTAATGTTCAAAGTGGCCAGGATTCACCTGTCATAAATTTCAAGTTCATCTTGGGAGTAGCTCTTGTGTCCATTGTCTTTGGCATAATTCTTGGGAAGCGTTACTAG 4074 0.3962 MEEETKVISEVPGTKVVVEADHNNDSIKETNGGLPSEVKKEEEDNALDGEFIKVEKEENAIDDKSHKTERSSDSPSREFLEAQEKIQELDVELQRLTESLKTSEHENNHLRGEISVTKEKLEESGKKYEELEMSHKKLQEQVVEAENKYNQQLSNLEEALQSQEVKQKELLNVKEKFDDINLELEHSRKKMQELQDELKLSADEARKFEELHKQSGSHAESEGKKVLEFERLLEEAKLTAKGMEDEMASLKEELKGVYDKISENQKIEEALKTTTAELSTIQEELTLSKSQLLEVEKRLSSRDSLVDELTQEVNLIKTSETQLKEDVSAFQNLLASTKEELQEKNFELETARSKLQEEEKLKESIEVALKNQETQFLNVQEELTKLKTENGTLESTLEDVTLNSKKFEELCTDLEERLKLSDENFLRTDFLLSQALSNNAELELKVKSLEDLHNESGAAAATATQRSLELEGHIQTSVEAAEVAKAQLRDLETRFIAAEQKNVELEQQLNLLQLKTSDADREVTELSEKISHLNAKLEEDKEEKNLINGQLQEYMEKVVQLESDLNKSSLRSSQLEEELKIVNDKCSEHEDRASMNHQRSRELEDLIQSSHSKLEDSDKKVSELELLLEAEKYRIQELEQQISALEDKCSVSEAQANKYLNDVSNLTSELEAIQARTSTLESTLQAANERGKELEDSLNSIMDEKKKLEDASSSLNEQLAEKENLVEILRDDLNLTQGKLQSTESDLRAAELRESDIIEKLKASEENVVIRGRDIEETATRHSELQLLHESLTRDAEQKLQEAIEKFSKKDSEVHSLLEKIKILEEKIALDGEQSTTLKNEFEESLSKLAALESENEDLKRQILEAESKSSQSFSENELLVGTNIELRTKIDELEESLNRALSEKDVTTQELESHKNSIAELNDLHSKSTKIQSANESRILEVESQLQEALQRHTEKESENKDLNEKLNTLEGQIKLFEEQAREAVATSGTHKAELEESLIKLKHLETVIEELQNKSLHHERETSGLNDENSKLNQEIAIYESKLSDLKSELSAALAEKDETVKEILTSKNAIEELVTKHSAEVQTLNSQLSSVIDEKNLLNETNQDIKKELQSLILDLEEKLKEQQKIEGSLRSEIETLKIEIAEKSVLQRQLEEIEGQLTKSASRLNEEVGSVQAAASQREAELNSKLVDYEQKFNDRNVLNEKVAELEKELQLARDALANQKEAESQKLELETALKNSVEELEIKKKDISLLQKQVADLEQKLQLASDKSSFKGDEGADKKEGLEVKSRDIGSSLSTPSKRKSKKKSEVPSAQTSSSSETNVQSGQDSPVINFKFILGVALVSIVFGIILGKRY* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00338 1357 Coils Coil 121 173 - -
Phac11g00338 1357 Coils Coil 621 767 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 1312 1328 - -
Phac11g00338 1357 Coils Coil 474 592 - -
Phac11g00338 1357 Coils Coil 940 988 - -
Phac11g00338 1357 PANTHER EARLY ENDOSOME ANTIGEN 1 1357 - -
Phac11g00338 1357 Coils Coil 226 260 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 34 80 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 1275 1291 - -
Phac11g00338 1357 Coils Coil 1193 1272 - -
Phac11g00338 1357 Coils Coil 264 284 - -
Phac11g00338 1357 SUPERFAMILY Tropomyosin 435 622 - -
Phac11g00338 1357 Coils Coil 996 1065 - -
Phac11g00338 1357 SUPERFAMILY Tropomyosin 612 847 - -
Phac11g00338 1357 Coils Coil 397 417 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 1273 1328 - -
Phac11g00338 1357 Coils Coil 432 452 - -
Phac11g00338 1357 Coils Coil 1140 1160 - -
Phac11g00338 1357 Coils Coil 177 211 - -
Phac11g00338 1357 Coils Coil 1091 1129 - -
Phac11g00338 1357 Coils Coil 79 113 - -
Phac11g00338 1357 Coils Coil 835 869 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 99 126 - -
Phac11g00338 1357 Gene3D - 597 770 - -
Phac11g00338 1357 Coils Coil 334 389 - -
Phac11g00338 1357 MobiDBLite consensus disorder prediction 18 80 - -
Phac11g00338 1357 Coils Coil 884 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00338 Phac-Chr11 2105167 2111447 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00338 - K20283 gmx:100792883 2115.89